HitPredict - High confidence protein-protein interactions

HitPredict

PHYSICAL PROTEIN-PROTEIN INTERACTIONS WITH RELIABILITY SCORES

Database Statistics


Experiments and Methods


Interaction scores

The number of high confidence interactions in HitPredict from each database and for each species are shown below. Interactions with an annotation score >= 0.5 or a method score >= 0.485, and having an interaction score > 0.28 are considered to be of high confidence.

References Yosvany Lopez, Kenta Nakai and Ashwini Patil; HitPredict version 4 - comprehensive reliability scoring of physical protein-protein interactions from more than 100 species, Database 2015:bav117, 2015 Ashwini Patil, Kenta Nakai and Haruki Nakamura; HitPredict: a database of quality-assessed protein-protein interactions in nine species, Nucl. Acids Res. 2011 Database Issue:D744-9 Ashwini Patil and Haruki Nakamura; Filtering high-throughput protein-protein interaction data using a combination of genomic features, BMC Bioinformatics, 2005, 6:100

Last updated: 18Jul2023 Service provided by Combinatics