*************Generated from HitPredict database (15Jul2024)************* List of interactions for P25539|RIBD|Escherichia coli K-12|Interactions:37 ************************************************************************ Interactor A ID Interactor B ID Interactor A Name Interactor B Name Interactor A Alias Interactor B Alias Interaction detection methods First author Publications Interactor A Taxonomy Interactor B Taxonomy Interaction type Source database Interaction identifier Confidence score uniprotkb:P25539 uniprotkb:P25539 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:RIBD_ECOLI(gene name) - - psi-mi:MI:0018(two hybrid)|psi-mi:MI:0397(two hybrid array) - pubmed:24561554 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0407(direct interaction)|psi-mi:MI:0915(physical association) psi-mi:MI:0469(intact) intact:EBI-9171635 annotation-score:1.00|method-score:0.49|interaction-score:0.698 uniprotkb:P25539 uniprotkb:P24182 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:ACCC_ECOLI(gene name) - - psi-mi:MI:0018(two hybrid)|psi-mi:MI:0676(tandem affinity purification)|psi-mi:MI:0096(pull down)|psi-mi:MI:0397(two hybrid array) - pubmed:24561554|pubmed:15690043|pubmed:19402753 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0407(direct interaction)|psi-mi:MI:0915(physical association)|psi-mi:MI:0914(association) psi-mi:MI:0469(intact) intact:EBI-9188467 annotation-score:0.50|method-score:0.75|interaction-score:0.611 uniprotkb:P25539 uniprotkb:P0A6F5 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:CH60_ECOLI(gene name) - - psi-mi:MI:0004(affinity chromatography technology)|psi-mi:MI:0676(tandem affinity purification)|psi-mi:MI:0096(pull down) - pubmed:16606699|pubmed:19402753|pubmed:15690043 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0915(physical association)|psi-mi:MI:0914(association) psi-mi:MI:0469(intact) intact:EBI-894235 annotation-score:0.50|method-score:0.74|interaction-score:0.609 uniprotkb:P25539 uniprotkb:P0A9Q5 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:ACCD_ECOLI(gene name) - - psi-mi:MI:0676(tandem affinity purification)|psi-mi:MI:0096(pull down) - pubmed:19402753|pubmed:15690043 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0915(physical association)|psi-mi:MI:0914(association) psi-mi:MI:0469(intact) intact:EBI-894235 annotation-score:0.55|method-score:0.58|interaction-score:0.563 uniprotkb:P25539 uniprotkb:P0ABD8 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:BCCP_ECOLI(gene name) - - psi-mi:MI:0676(tandem affinity purification)|psi-mi:MI:0096(pull down) - pubmed:19402753|pubmed:15690043 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0915(physical association)|psi-mi:MI:0914(association) psi-mi:MI:0469(intact) intact:EBI-894235 annotation-score:0.50|method-score:0.58|interaction-score:0.537 uniprotkb:P25539 uniprotkb:P0A7V0 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:RS2_ECOLI(gene name) - - psi-mi:MI:0676(tandem affinity purification)|psi-mi:MI:0096(pull down) - pubmed:15690043 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0915(physical association)|psi-mi:MI:0914(association) psi-mi:MI:0469(intact) intact:EBI-894235 annotation-score:0.55|method-score:0.48|interaction-score:0.513 uniprotkb:P25539 uniprotkb:P0A8D0 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:NRDR_ECOLI(gene name) - - psi-mi:MI:0004(affinity chromatography technology)|psi-mi:MI:0096(pull down) - pubmed:16606699 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0915(physical association)|psi-mi:MI:0914(association) psi-mi:MI:0469(intact) intact:EBI-1136500 annotation-score:0.55|method-score:0.48|interaction-score:0.513 uniprotkb:P25539 uniprotkb:P0A9A9 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:FUR_ECOLI(gene name) - - psi-mi:MI:0004(affinity chromatography technology)|psi-mi:MI:0096(pull down) - pubmed:16606699 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0915(physical association)|psi-mi:MI:0914(association) psi-mi:MI:0469(intact) intact:EBI-1136506 annotation-score:0.55|method-score:0.48|interaction-score:0.513 uniprotkb:P25539 uniprotkb:P61714 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:RISB_ECOLI(gene name) - - psi-mi:MI:0676(tandem affinity purification)|psi-mi:MI:0096(pull down) - pubmed:15690043 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0915(physical association)|psi-mi:MI:0914(association) psi-mi:MI:0469(intact) intact:EBI-894235 annotation-score:0.55|method-score:0.48|interaction-score:0.513 uniprotkb:P25539 uniprotkb:P02359 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:RS7_ECOLI(gene name) - - psi-mi:MI:0676(tandem affinity purification)|psi-mi:MI:0096(pull down) - pubmed:15690043 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0915(physical association)|psi-mi:MI:0914(association) psi-mi:MI:0469(intact) intact:EBI-894235 annotation-score:0.50|method-score:0.48|interaction-score:0.489 uniprotkb:P25539 uniprotkb:P0AFU8 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:RISA_ECOLI(gene name) - - psi-mi:MI:0676(tandem affinity purification) - pubmed:19402753 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0915(physical association) psi-mi:MI:0465(dip) dip:DIP-99534E annotation-score:0.55|method-score:0.38|interaction-score:0.458 uniprotkb:P25539 uniprotkb:P08550 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:CVPA_ECOLI(gene name) - - psi-mi:MI:0676(tandem affinity purification)|psi-mi:MI:0096(pull down) - pubmed:15690043|pubmed:19402753 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0915(physical association)|psi-mi:MI:0914(association) psi-mi:MI:0469(intact) intact:EBI-894235 annotation-score:0.16|method-score:0.62|interaction-score:0.318 uniprotkb:P25539 uniprotkb:P0A6H5 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:HSLU_ECOLI(gene name) - - psi-mi:MI:0676(tandem affinity purification)|psi-mi:MI:0096(pull down) - pubmed:15690043|pubmed:19402753 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0915(physical association)|psi-mi:MI:0914(association) psi-mi:MI:0469(intact) intact:EBI-886932 annotation-score:0.16|method-score:0.62|interaction-score:0.318 uniprotkb:P25539 uniprotkb:P76172 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:YNFD_ECOLI(gene name) - - psi-mi:MI:0676(tandem affinity purification)|psi-mi:MI:0096(pull down) - pubmed:19402753|pubmed:15690043 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0915(physical association)|psi-mi:MI:0914(association) psi-mi:MI:0469(intact) intact:EBI-894235 annotation-score:0.16|method-score:0.62|interaction-score:0.318 uniprotkb:P25539 uniprotkb:P76577 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:PBPC_ECOLI(gene name) - - psi-mi:MI:0676(tandem affinity purification)|psi-mi:MI:0096(pull down) - pubmed:15690043|pubmed:19402753 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0915(physical association)|psi-mi:MI:0914(association) psi-mi:MI:0469(intact) intact:EBI-894235 annotation-score:0.16|method-score:0.62|interaction-score:0.318 uniprotkb:P25539 uniprotkb:P0A8V2 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:RPOB_ECOLI(gene name) - - psi-mi:MI:0676(tandem affinity purification)|psi-mi:MI:0096(pull down) - pubmed:19402753|pubmed:15690043 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0915(physical association)|psi-mi:MI:0914(association) psi-mi:MI:0469(intact) intact:EBI-883170 annotation-score:0.16|method-score:0.58|interaction-score:0.307 uniprotkb:P25539 uniprotkb:P0AB55 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:YCII_ECOLI(gene name) - - psi-mi:MI:0676(tandem affinity purification)|psi-mi:MI:0096(pull down) - pubmed:19402753|pubmed:15690043 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0915(physical association)|psi-mi:MI:0914(association) psi-mi:MI:0469(intact) intact:EBI-894235 annotation-score:0.16|method-score:0.58|interaction-score:0.307 uniprotkb:P25539 uniprotkb:P0ACK2 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:AGAR_ECOLI(gene name) - - psi-mi:MI:0676(tandem affinity purification)|psi-mi:MI:0096(pull down) - pubmed:19402753|pubmed:15690043 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0915(physical association)|psi-mi:MI:0914(association) psi-mi:MI:0469(intact) intact:EBI-894235 annotation-score:0.16|method-score:0.58|interaction-score:0.307 uniprotkb:P25539 uniprotkb:P69811 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:PTFAH_ECOLI(gene name) - - psi-mi:MI:0676(tandem affinity purification)|psi-mi:MI:0096(pull down) - pubmed:19402753|pubmed:15690043 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0915(physical association)|psi-mi:MI:0914(association) psi-mi:MI:0469(intact) intact:EBI-894235 annotation-score:0.16|method-score:0.58|interaction-score:0.307 uniprotkb:P25539 uniprotkb:P09557 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:DICB_ECOLI(gene name) - - psi-mi:MI:0018(two hybrid)|psi-mi:MI:0397(two hybrid array) - pubmed:24561554 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0407(direct interaction)|psi-mi:MI:0915(physical association) psi-mi:MI:0469(intact) intact:EBI-9188677 annotation-score:0.16|method-score:0.49|interaction-score:0.282 uniprotkb:P25539 uniprotkb:P0A937 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:BAME_ECOLI(gene name) - - psi-mi:MI:0018(two hybrid)|psi-mi:MI:0397(two hybrid array) - pubmed:24561554 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0407(direct interaction)|psi-mi:MI:0915(physical association) psi-mi:MI:0469(intact) intact:EBI-9179361 annotation-score:0.16|method-score:0.49|interaction-score:0.282 uniprotkb:P25539 uniprotkb:P68646 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:FIXX_ECOLI(gene name) - - psi-mi:MI:0018(two hybrid)|psi-mi:MI:0397(two hybrid array) - pubmed:24561554 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0407(direct interaction)|psi-mi:MI:0915(physical association) psi-mi:MI:0469(intact) intact:EBI-9188691 annotation-score:0.16|method-score:0.49|interaction-score:0.282 uniprotkb:P25539 uniprotkb:P77609 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:FLXA_ECOLI(gene name) - - psi-mi:MI:0018(two hybrid)|psi-mi:MI:0397(two hybrid array) - pubmed:24561554 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0407(direct interaction)|psi-mi:MI:0915(physical association) psi-mi:MI:0469(intact) intact:EBI-9188705 annotation-score:0.16|method-score:0.49|interaction-score:0.282 uniprotkb:P25539 uniprotkb:P0A6D0 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:ARGR_ECOLI(gene name) - - psi-mi:MI:0004(affinity chromatography technology)|psi-mi:MI:0096(pull down) - pubmed:16606699 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0915(physical association)|psi-mi:MI:0914(association) psi-mi:MI:0469(intact) intact:EBI-1145252 annotation-score:0.16|method-score:0.48|interaction-score:0.279 uniprotkb:P25539 uniprotkb:P0A9H5 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:BTUR_ECOLI(gene name) - - psi-mi:MI:0004(affinity chromatography technology)|psi-mi:MI:0096(pull down) - pubmed:16606699 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0915(physical association)|psi-mi:MI:0914(association) psi-mi:MI:0469(intact) intact:EBI-1139399 annotation-score:0.16|method-score:0.48|interaction-score:0.279 uniprotkb:P25539 uniprotkb:P0ACB4 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:HEMG_ECOLI(gene name) - - psi-mi:MI:0004(affinity chromatography technology)|psi-mi:MI:0096(pull down) - pubmed:16606699 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0915(physical association)|psi-mi:MI:0914(association) psi-mi:MI:0469(intact) intact:EBI-1136506 annotation-score:0.16|method-score:0.48|interaction-score:0.279 uniprotkb:P25539 uniprotkb:P18843 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:NADE_ECOLI(gene name) - - psi-mi:MI:0004(affinity chromatography technology)|psi-mi:MI:0096(pull down) - pubmed:16606699 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0915(physical association)|psi-mi:MI:0914(association) psi-mi:MI:0469(intact) intact:EBI-1136506 annotation-score:0.16|method-score:0.48|interaction-score:0.279 uniprotkb:P25539 uniprotkb:P60438 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:RL3_ECOLI(gene name) - - psi-mi:MI:0676(tandem affinity purification)|psi-mi:MI:0096(pull down) - pubmed:15690043 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0915(physical association)|psi-mi:MI:0914(association) psi-mi:MI:0469(intact) intact:EBI-894235 annotation-score:0.16|method-score:0.48|interaction-score:0.279 uniprotkb:P25539 uniprotkb:P77260 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:YDFI_ECOLI(gene name) - - psi-mi:MI:0004(affinity chromatography technology)|psi-mi:MI:0096(pull down) - pubmed:16606699 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0915(physical association)|psi-mi:MI:0914(association) psi-mi:MI:0469(intact) intact:EBI-1140107 annotation-score:0.16|method-score:0.48|interaction-score:0.279 uniprotkb:P25539 uniprotkb:P0A705 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:IF2_ECOLI(gene name) - - psi-mi:MI:0676(tandem affinity purification)|psi-mi:MI:0096(pull down) - pubmed:15690043 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0914(association) psi-mi:MI:0469(intact) intact:EBI-889882 annotation-score:0.16|method-score:0.39|interaction-score:0.253 uniprotkb:P25539 uniprotkb:P0A7K6 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:RL19_ECOLI(gene name) - - psi-mi:MI:0676(tandem affinity purification)|psi-mi:MI:0096(pull down) - pubmed:15690043 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0914(association) psi-mi:MI:0469(intact) intact:EBI-894235 annotation-score:0.16|method-score:0.39|interaction-score:0.253 uniprotkb:P25539 uniprotkb:P0A7V8 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:RS4_ECOLI(gene name) - - psi-mi:MI:0676(tandem affinity purification)|psi-mi:MI:0096(pull down) - pubmed:15690043 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0914(association) psi-mi:MI:0469(intact) intact:EBI-894235 annotation-score:0.16|method-score:0.39|interaction-score:0.253 uniprotkb:P25539 uniprotkb:P0ACF0 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:DBHA_ECOLI(gene name) - - psi-mi:MI:0676(tandem affinity purification)|psi-mi:MI:0096(pull down) - pubmed:15690043 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0914(association) psi-mi:MI:0469(intact) intact:EBI-894235 annotation-score:0.16|method-score:0.39|interaction-score:0.253 uniprotkb:P25539 uniprotkb:P0AG48 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:RL21_ECOLI(gene name) - - psi-mi:MI:0676(tandem affinity purification)|psi-mi:MI:0096(pull down) - pubmed:15690043 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0914(association) psi-mi:MI:0469(intact) intact:EBI-894235 annotation-score:0.16|method-score:0.39|interaction-score:0.253 uniprotkb:P25539 uniprotkb:P60723 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:RL4_ECOLI(gene name) - - psi-mi:MI:0676(tandem affinity purification)|psi-mi:MI:0096(pull down) - pubmed:15690043 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0914(association) psi-mi:MI:0469(intact) intact:EBI-894235 annotation-score:0.16|method-score:0.39|interaction-score:0.253 uniprotkb:P25539 uniprotkb:P62399 uniprotkb:RIBD_ECOLI(gene name) uniprotkb:RL5_ECOLI(gene name) - - psi-mi:MI:0676(tandem affinity purification)|psi-mi:MI:0096(pull down) - pubmed:15690043 taxid:83333(Escherichia coli K-12) taxid:83333(Escherichia coli K-12) psi-mi:MI:0914(association) psi-mi:MI:0469(intact) intact:EBI-894235 annotation-score:0.16|method-score:0.39|interaction-score:0.253 *************Service provided by Combinatics****************************