HitPredict - High confidence protein-protein interactions

Protein: LSM6A
Sm-like protein LSM6A (AtLSM6A) (U6 snRNA-associated Sm-like protein LSM6A)

Gene: LSM6A
Organism: Arabidopsis thaliana
Interactions: 6
UniProt ID: Q9M1Z3

Gene Ontology (top 5):
GO:0000290 - deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0000398 - mRNA splicing, via spliceosome
GO:0000932 - P-body
GO:0003723 - RNA binding
GO:0005634 - nucleus

Download interactions: TXT MITAB-2.5

Interaction	Interactor	Experiments	Homologs	Category	Interaction Score	Confidence
1323924	LSM5 Sm-like protein LSM5	2	20	High-throughput	0.800	High
1227145	Q8LAK5 Small nuclear ribonucleoprotein E	1	15	High-throughput	0.698	High
1228011	LSM1B Sm-like protein LSM1B	1	20	High-throughput	0.698	High
1340905	LSM7 Sm-like protein LSM7	1	20	High-throughput	0.698	High
1340906	Q9ZV45 Small nuclear ribonucleoprotein E	1	15	High-throughput	0.698	High
1277780	CSP3 Cold shock domain-containing protein 3	1	4	Small-scale	0.481	High

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024