Protein: NUP88
Nuclear pore complex protein Nup88 (88 kDa nucleoporin) (Nucleoporin Nup88)

Gene: NUP88
Organism: Homo sapiens
Interactions: 126
UniProt ID: Q99567

Gene Ontology (top 5):
GO:0000055 - ribosomal large subunit export from nucleus
GO:0000056 - ribosomal small subunit export from nucleus
GO:0005635 - nuclear envelope
GO:0005643 - nuclear pore
GO:0005654 - nucleoplasm

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

727307

NU214
Nuclear pore complex protein Nup214

7

2

Small-scale

0.747

High

858038

NUP98
Nuclear pore complex protein Nup98-Nup96

4

3

Small-scale

0.705

High

740241

NUP62
Nuclear pore glycoprotein p62

4

3

High-throughput

0.698

High

163179

XPO1
Exportin-1

3

3

Small-scale

0.667

High

1304558

DD19A
ATP-dependent RNA helicase DDX19A

3

1

High-throughput

0.667

High

1304555

N62CL
Nucleoporin-62 C-terminal-like protein

2

2

High-throughput

0.628

High

1042362

CUL3
Cullin-3

2

1

High-throughput

0.611

High

1289590

SEH1
Nucleoporin SEH1

2

1

High-throughput

0.611

High

1304565

G3BP2
Ras GTPase-activating protein-binding protein 2

2

2

High-throughput

0.611

High

1304551

TRI62
E3 ubiquitin-protein ligase TRIM62

2

0

High-throughput

0.602

High

201051

VIP2
Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2

2

1

High-throughput

0.584

High

1304560

TFP11
Tuftelin-interacting protein 11

2

0

High-throughput

0.580

High

228463

PRKN
E3 ubiquitin-protein ligase parkin

2

0

High-throughput

0.559

High

1244671

NUP35
Nucleoporin NUP35

2

0

High-throughput

0.559

High

1304561

NXF1
Nuclear RNA export factor 1

2

0

Small-scale

0.547

High

569117

DESM
Desmin

1

1

High-throughput

0.536

High

834659

NU153
Nuclear pore complex protein Nup153

1

4

High-throughput

0.536

High

903840

NTF2
Nuclear transport factor 2

1

2

High-throughput

0.536

High

1030433

G3BP1
Ras GTPase-activating protein-binding protein 1

1

2

High-throughput

0.536

High

1041444

CUL2
Cullin-2

1

1

High-throughput

0.536

High

1061216

NUMA1
Nuclear mitotic apparatus protein 1

1

1

High-throughput

0.536

High

536644

FPPS
Farnesyl pyrophosphate synthase

1

0

High-throughput

0.513

High

796790

RANG
Ran-specific GTPase-activating protein

1

0

High-throughput

0.513

High

884785

NU107
Nuclear pore complex protein Nup107

1

0

High-throughput

0.513

High

919234

RAN
GTP-binding nuclear protein Ran

1

0

High-throughput

0.513

High

1060888

IMB1
Importin subunit beta-1

1

0

High-throughput

0.513

High

1068419

PMVK
Phosphomevalonate kinase

1

0

High-throughput

0.513

High

1077093

MARE1
Microtubule-associated protein RP/EB family member 1

1

0

High-throughput

0.513

High

1202065

CAND1
Cullin-associated NEDD8-dissociated protein 1

1

0

High-throughput

0.513

High

1304567

KCC2A
Calcium/calmodulin-dependent protein kinase type II subunit alpha

1

0

High-throughput

0.513

High

1297440

IMP1L
Mitochondrial inner membrane protease subunit 1

1

1

High-throughput

0.489

High

1302805

IMP2L
Mitochondrial inner membrane protease subunit 2

1

1

High-throughput

0.489

High

149206

CTRO
Citron Rho-interacting kinase

1

1

High-throughput

0.479

High

301990

TRI37
E3 ubiquitin-protein ligase TRIM37

1

1

High-throughput

0.479

High

347684

MYC
Myc proto-oncogene protein

1

1

High-throughput

0.479

High

379770

MYCN
N-myc proto-oncogene protein

1

1

High-throughput

0.479

High

921693

GBB2
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2

1

1

High-throughput

0.479

High

943889

RAE1L
mRNA export factor RAE1

1

1

High-throughput

0.479

High

1113833

GRDN
Girdin

1

1

High-throughput

0.479

High

1121099

GLE1
mRNA export factor GLE1

1

2

High-throughput

0.479

High

1146767

A16L1
Autophagy-related protein 16-1

1

2

High-throughput

0.479

High

1236456

SIR6
NAD-dependent protein deacylase sirtuin-6

1

1

High-throughput

0.479

High

1244453

NUP43
Nucleoporin Nup43

1

1

High-throughput

0.479

High

1246153

COP1
E3 ubiquitin-protein ligase COP1

1

1

High-throughput

0.479

High

1254235

BICD2
Protein bicaudal D homolog 2

1

2

High-throughput

0.479

High

1255944

DCA11
DDB1- and CUL4-associated factor 11

1

1

High-throughput

0.479

High

1304060

RING2
E3 ubiquitin-protein ligase RING2

1

1

High-throughput

0.479

High

1304557

SIR7
NAD-dependent protein deacetylase sirtuin-7

1

1

High-throughput

0.479

High

1304562

ZRAN1
Ubiquitin thioesterase ZRANB1

1

1

High-throughput

0.479

High

1304563

ANC2
Anaphase-promoting complex subunit 2

1

2

High-throughput

0.479

High

1304564

DD19B
ATP-dependent RNA helicase DDX19B

1

1

High-throughput

0.479

High

56551

PTPC1
Protein tyrosine phosphatase domain-containing protein 1

1

0

High-throughput

0.458

High

119491

LEG9
Galectin-9

1

0

High-throughput

0.458

High

182869

R113A
E3 ubiquitin-protein ligase RNF113A

1

0

High-throughput

0.458

High

200899

CTIF
CBP80/20-dependent translation initiation factor

1

0

High-throughput

0.458

High

232458

KDM1A
Lysine-specific histone demethylase 1A

1

0

High-throughput

0.458

High

233604

NUPR1
Nuclear protein 1

1

0

High-throughput

0.458

High

262081

PEX14
Peroxisomal membrane protein PEX14

1

0

High-throughput

0.458

High

273959

NU155
Nuclear pore complex protein Nup155

1

0

High-throughput

0.458

High

295167

RECQ4
ATP-dependent DNA helicase Q4

1

0

High-throughput

0.458

High

315755

SC24B
Protein transport protein Sec24B

1

0

High-throughput

0.458

High

387367

P53
Cellular tumor antigen p53

1

0

Small-scale

0.458

High

409208

K2C8
Keratin, type II cytoskeletal 8

1

0

High-throughput

0.458

High

444462

K1C19
Keratin, type I cytoskeletal 19

1

0

High-throughput

0.458

High

451542

CLCA
Clathrin light chain A

1

0

High-throughput

0.458

High

553520

RFA2
Replication protein A 32 kDa subunit

1

0

High-throughput

0.458

High

575829

VINC
Vinculin

1

0

High-throughput

0.458

High

622614

RAE1
Rab proteins geranylgeranyltransferase component A 1

1

0

High-throughput

0.458

High

652050

RFA1
Replication protein A 70 kDa DNA-binding subunit

1

0

High-throughput

0.458

High

721245

RFA3
Replication protein A 14 kDa subunit

1

0

High-throughput

0.458

High

779970

CCNF
Cyclin-F

1

0

High-throughput

0.458

High

781653

ETV6
Transcription factor ETV6

1

0

High-throughput

0.458

High

799140

NKX21
Homeobox protein Nkx-2.1

1

0

High-throughput

0.458

High

823479

PAXI
Paxillin

1

0

High-throughput

0.458

High

903458

WDR5
WD repeat-containing protein 5

1

0

High-throughput

0.458

High

917799

H4
Histone H4

1

0

High-throughput

0.458

High

961250

HSF1
Heat shock factor protein 1

1

0

High-throughput

0.458

High

963885

SET
Protein SET

1

0

Small-scale

0.458

High

1029783

TIF1B
Transcription intermediary factor 1-beta

1

0

High-throughput

0.458

High

1036002

BIRC3
Baculoviral IAP repeat-containing protein 3

1

0

High-throughput

0.458

High

1038658

HDAC1
Histone deacetylase 1

1

0

High-throughput

0.458

High

1039301

DCTN2
Dynactin subunit 2

1

0

High-throughput

0.458

High

1044087

DYR1A
Dual specificity tyrosine-phosphorylation-regulated kinase 1A

1

0

High-throughput

0.458

High

1063577

SUZ12
Polycomb protein SUZ12

1

0

High-throughput

0.458

High

1066574

KIF14
Kinesin-like protein KIF14

1

0

High-throughput

0.458

High

1068642

PLEC
Plectin

1

0

High-throughput

0.458

High

1085894

IF16
Gamma-interferon-inducible protein 16

1

0

High-throughput

0.458

High

1101241

CL16A
Protein CLEC16A

1

0

High-throughput

0.458

High

1101674

AAK1
AP2-associated protein kinase 1

1

0

High-throughput

0.458

High

1135123

ACBD5
Acyl-CoA-binding domain-containing protein 5

1

0

High-throughput

0.458

High

1168648

SYNE3
Nesprin-3

1

0

High-throughput

0.458

High

1190865

EMSY
BRCA2-interacting transcriptional repressor EMSY

1

0

High-throughput

0.458

High

1193159

SLN11
Schlafen family member 11

1

0

High-throughput

0.458

High

1200604

NAA40
N-alpha-acetyltransferase 40

1

0

High-throughput

0.458

High

1269440

ESR2
Estrogen receptor beta

1

0

High-throughput

0.458

High

1281823

FBX32
F-box only protein 32

1

0

High-throughput

0.458

High

1285339

PF21A
PHD finger protein 21A

1

0

High-throughput

0.458

High

1304550

TBX5
T-box transcription factor TBX5

1

0

High-throughput

0.458

High

1304552

NUP85
Nuclear pore complex protein Nup85

1

0

High-throughput

0.458

High

1304559

TLS1
Splicing factor C9orf78

1

0

High-throughput

0.458

High

306286

GBRAP
Gamma-aminobutyric acid receptor-associated protein

1

3

High-throughput

0.445

High

891279

GBRL2
Gamma-aminobutyric acid receptor-associated protein-like 2

1

3

High-throughput

0.445

High

1161338

VIP1
Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1

1

1

High-throughput

0.445

High

1304553

MLP3B
Microtubule-associated proteins 1A/1B light chain 3B

1

3

High-throughput

0.445

High

1304554

GBRL1
Gamma-aminobutyric acid receptor-associated protein-like 1

1

3

High-throughput

0.445

High

1304556

PKHA4
Pleckstrin homology domain-containing family A member 4

1

1

High-throughput

0.437

High

709018

MCM7
DNA replication licensing factor MCM7

1

0

Small-scale

0.426

High

998164

NCBP1
Nuclear cap-binding protein subunit 1

1

0

High-throughput

0.426

High

1130483

LRRK2
Leucine-rich repeat serine/threonine-protein kinase 2

1

0

High-throughput

0.426

High

1304566

DICER
Endoribonuclease Dicer

1

0

Small-scale

0.426

High

1304568

ST38L
Serine/threonine-protein kinase 38-like

1

0

High-throughput

0.426

High

1304569

COG6
Conserved oligomeric Golgi complex subunit 6

2

0

High-throughput

0.328

High

674872

AGTR1
Type-1 angiotensin II receptor

1

0

High-throughput

0.282

High

1159483

DJC24
DnaJ homolog subfamily C member 24

1

0

High-throughput

0.279

Low

385403

NTRK1
High affinity nerve growth factor receptor

1

0

High-throughput

0.249

Low

1165888

LMBRL
Protein LMBR1L

1

0

High-throughput

0.249

Low

1167237

DPPA3
Developmental pluripotency-associated protein 3

1

0

High-throughput

0.249

Low

1171383

TRI67
Tripartite motif-containing protein 67

1

0

High-throughput

0.249

Low

1188767

PARPT
Protein mono-ADP-ribosyltransferase TIPARP

1

0

High-throughput

0.249

Low

1221262

PDZD9
PDZ domain-containing protein 9

1

0

High-throughput

0.249

Low

1230167

CNTRB
Centrobin

1

0

High-throughput

0.249

Low

1231314

RHG24
Rho GTPase-activating protein 24

1

0

High-throughput

0.249

Low

1284621

VP33A
Vacuolar protein sorting-associated protein 33A

1

0

High-throughput

0.249

Low

1292749

BORC6
BLOC-1-related complex subunit 6

1

0

High-throughput

0.249

Low

653100

CD82
CD82 antigen

1

0

High-throughput

0.238

Low

1047227

CAC1C
Voltage-dependent L-type calcium channel subunit alpha-1C

1

0

High-throughput

0.232

Low


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Last updated: 15 Jul 2024