Protein: RTF1
RNA polymerase-associated protein RTF1 homolog

Gene: RTF1
Organism: Homo sapiens
Interactions: 89
UniProt ID: Q92541

Gene Ontology (top 5):
GO:0000122 - negative regulation of transcription by RNA polymerase II
GO:0001711 - endodermal cell fate commitment
GO:0001832 - blastocyst growth
GO:0003697 - single-stranded DNA binding
GO:0003723 - RNA binding

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

1237139

PAF1
RNA polymerase II-associated factor 1 homolog

5

2

Small-scale

0.709

High

827254

ARRB1
Beta-arrestin-1

3

1

High-throughput

0.671

High

1160953

CTR9
RNA polymerase-associated protein CTR9 homolog

3

2

Small-scale

0.650

High

1261230

LEO1
RNA polymerase-associated protein LEO1

3

2

Small-scale

0.650

High

1266744

DEN2D
DENN domain-containing protein 2D

3

0

High-throughput

0.638

High

686022

ARRB2
Beta-arrestin-2

2

1

High-throughput

0.628

High

817718

PI42A
Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha

2

1

High-throughput

0.628

High

586888

CSK22
Casein kinase II subunit alpha'

2

4

High-throughput

0.611

High

934352

CSK21
Casein kinase II subunit alpha

2

4

High-throughput

0.611

High

1158293

CDC73
Parafibromin

2

1

Small-scale

0.601

High

228224

PRKN
E3 ubiquitin-protein ligase parkin

2

1

High-throughput

0.584

High

942847

SRPK2
SRSF protein kinase 2

1

2

High-throughput

0.569

High

808206

NEDD4
E3 ubiquitin-protein ligase NEDD4

1

0

High-throughput

0.554

High

1253104

PI42C
Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma

1

1

High-throughput

0.536

High

1087302

H2B2E
Histone H2B type 2-E

1

2

High-throughput

0.515

High

259761

PDCD6
Programmed cell death protein 6

1

0

High-throughput

0.513

High

796148

MAGA9
Melanoma-associated antigen 9

1

0

High-throughput

0.513

High

1232262

PLCD3
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3

1

0

High-throughput

0.513

High

1266736

HS105
Heat shock protein 105 kDa

1

0

High-throughput

0.513

High

1266743

SKI8
Superkiller complex protein 8

1

0

Small-scale

0.513

High

613001

TCEA1
Transcription elongation factor A protein 1

1

0

Small-scale

0.494

High

899656

FGF12
Fibroblast growth factor 12

1

1

High-throughput

0.489

High

1266739

H2AJ
Histone H2A.J

1

1

High-throughput

0.489

High

476128

UBC
Polyubiquitin-C [Cleaved into: Ubiquitin]

1

0

High-throughput

0.480

High

571179

EGLN
Endoglin

1

0

High-throughput

0.480

High

124028

SPT5H
Transcription elongation factor SPT5

1

2

High-throughput

0.479

High

244716

BRD4
Bromodomain-containing protein 4

1

4

High-throughput

0.479

High

246597

MCE1
mRNA-capping enzyme

1

1

High-throughput

0.479

High

360227

LMNA
Prelamin-A/C [Cleaved into: Lamin-A/C

1

1

High-throughput

0.479

High

415010

CDK1
Cyclin-dependent kinase 1

1

2

High-throughput

0.479

High

455711

PARP1
Poly [ADP-ribose] polymerase 1

1

1

High-throughput

0.479

High

531226

EF2
Elongation factor 2

1

1

High-throughput

0.479

High

631531

BRD2
Bromodomain-containing protein 2

1

4

High-throughput

0.479

High

665931

PTN6
Tyrosine-protein phosphatase non-receptor type 6

1

1

Small-scale

0.479

High

828326

CENPA
Histone H3-like centromeric protein A

1

1

High-throughput

0.479

High

918564

H2B1C
Histone H2B type 1-C/E/F/G/I

1

2

High-throughput

0.479

High

986004

PTN11
Tyrosine-protein phosphatase non-receptor type 11

1

1

Small-scale

0.479

High

998928

EP300
Histone acetyltransferase p300

1

2

High-throughput

0.479

High

1055439

DHX8
ATP-dependent RNA helicase DHX8

1

1

High-throughput

0.479

High

1064537

U5S1
116 kDa U5 small nuclear ribonucleoprotein component

1

1

High-throughput

0.479

High

1220243

DHX40
Probable ATP-dependent RNA helicase DHX40

1

1

High-throughput

0.479

High

1243541

CSK23
Casein kinase II subunit alpha 3

1

4

High-throughput

0.479

High

1266740

DDX23
Probable ATP-dependent RNA helicase DDX23

1

2

High-throughput

0.479

High

1266747

DNM3B
DNA

1

1

Small-scale

0.479

High

1266751

DNM3A
DNA

1

1

Small-scale

0.479

High

133592

NOP56
Nucleolar protein 56

1

0

High-throughput

0.458

High

179749

RPA34
DNA-directed RNA polymerase I subunit RPA34

1

0

High-throughput

0.458

High

211042

BUB1
Mitotic checkpoint serine/threonine-protein kinase BUB1

1

0

High-throughput

0.458

High

347459

MYC
Myc proto-oncogene protein

1

0

High-throughput

0.458

High

523905

XRCC6
X-ray repair cross-complementing protein 6

1

0

High-throughput

0.458

High

569913

CEBPB
CCAAT/enhancer-binding protein beta

1

0

High-throughput

0.458

High

652938

APEX1
DNA repair nuclease/redox regulator APEX1

1

0

High-throughput

0.458

High

721038

RFA3
Replication protein A 14 kDa subunit

1

0

High-throughput

0.458

High

750383

COIL
Coilin

1

0

High-throughput

0.458

High

876025

ECHB
Trifunctional enzyme subunit beta, mitochondrial

1

0

High-throughput

0.458

High

916733

RS6
Small ribosomal subunit protein eS6

1

0

High-throughput

0.458

High

922284

RL31
Large ribosomal subunit protein eL31

1

0

High-throughput

0.458

High

986949

SUH
Recombining binding protein suppressor of hairless

1

0

High-throughput

0.458

High

1027154

CBX3
Chromobox protein homolog 3

1

0

High-throughput

0.458

High

1266737

KAT6A
Histone acetyltransferase KAT6A

1

0

High-throughput

0.458

High

1266741

RIOK2
Serine/threonine-protein kinase RIO2

1

0

High-throughput

0.458

High

1266742

MK67I
MKI67 FHA domain-interacting nucleolar phosphoprotein

1

0

High-throughput

0.458

High

1266746

TE2IP
Telomeric repeat-binding factor 2-interacting protein 1

1

0

High-throughput

0.458

High

1266748

ZRAN1
Ubiquitin thioesterase ZRANB1

1

0

High-throughput

0.458

High

1266750

ZN330
Zinc finger protein 330

1

0

High-throughput

0.458

High

624974

RPB1
DNA-directed RNA polymerase II subunit RPB1

1

1

Small-scale

0.445

High

829043

UBE2A
Ubiquitin-conjugating enzyme E2 A

1

2

Small-scale

0.445

High

927765

UBE2B
Ubiquitin-conjugating enzyme E2 B

1

2

Small-scale

0.445

High

908895

UBE2H
Ubiquitin-conjugating enzyme E2 H

1

2

High-throughput

0.437

High

1266738

FGF11
Fibroblast growth factor 11

1

1

High-throughput

0.437

High

395352

A4
Amyloid-beta precursor protein

2

0

High-throughput

0.314

High

323931

BAG2
BAG family molecular chaperone regulator 2

1

0

High-throughput

0.279

Low

871706

HSP72
Heat shock-related 70 kDa protein 2

1

0

High-throughput

0.279

Low

951885

SERF2
Small EDRK-rich factor 2

1

0

High-throughput

0.279

Low

1231399

CT197
Putative uncharacterized protein encoded by LINC02910

1

0

High-throughput

0.279

Low

1238329

SYT2
Synaptotagmin-2

1

0

High-throughput

0.279

Low

1266745

PKHJ1
Pleckstrin homology domain-containing family J member 1

1

0

High-throughput

0.279

Low

1266749

E41L3
Band 4.1-like protein 3

1

0

High-throughput

0.279

Low

385259

NTRK1
High affinity nerve growth factor receptor

1

0

High-throughput

0.249

Low

659307

DUS1
Dual specificity protein phosphatase 1

1

0

Small-scale

0.249

Low

778230

ECHA
Trifunctional enzyme subunit alpha, mitochondrial

1

0

High-throughput

0.249

Low

887915

CD81
CD81 antigen

1

0

High-throughput

0.249

Low

932294

ACTC
Actin, alpha cardiac muscle 1

1

0

High-throughput

0.249

Low

976247

UPAR
Urokinase plasminogen activator surface receptor

1

0

Small-scale

0.249

Low

1018179

M4K2
Mitogen-activated protein kinase kinase kinase kinase 2

1

0

High-throughput

0.249

Low

1171032

TRI67
Tripartite motif-containing protein 67

1

0

High-throughput

0.249

Low

1188635

PARPT
Protein mono-ADP-ribosyltransferase TIPARP

1

0

High-throughput

0.249

Low

1231775

FA43A
Protein FAM43A

1

0

Small-scale

0.249

Low

1243868

FBX22
F-box only protein 22

1

0

High-throughput

0.249

Low


Service provided by Combinatics, Japan

Last updated: 15 Jul 2024