Protein: RPB11
DNA-directed RNA polymerase II subunit RPB11 (RNA polymerase II subunit B11) (B13.6) (DNA-directed RNA polymerase II 13.6 kDa polypeptide)

Gene: RPB11
Organism: Saccharomyces cerevisiae S288C
Interactions: 67
UniProt ID: P38902

Gene Ontology (top 5):
GO:0001055 - RNA polymerase II activity
GO:0001172 - RNA-templated transcription
GO:0003677 - DNA binding
GO:0005634 - nucleus
GO:0005665 - RNA polymerase II, core complex

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

558050

RPB3
DNA-directed RNA polymerase II subunit RPB3

22

17

Small-scale

0.990

High

375385

RPB1
DNA-directed RNA polymerase II subunit RPB1

10

11

Small-scale

0.969

High

593314

RPAB3
DNA-directed RNA polymerases I, II, and III subunit RPABC3

6

3

Small-scale

0.933

High

440032

RPB2
DNA-directed RNA polymerase II subunit RPB2

5

9

Small-scale

0.919

High

757139

T2FB
Transcription initiation factor IIF subunit beta

8

1

Small-scale

0.746

High

593063

RPB4
DNA-directed RNA polymerase II subunit RPB4

7

2

Small-scale

0.739

High

593142

RPAB1
DNA-directed RNA polymerases I, II, and III subunit RPABC1

7

3

Small-scale

0.737

High

710008

RPB7
DNA-directed RNA polymerase II subunit RPB7

6

5

Small-scale

0.730

High

655559

RPB9
DNA-directed RNA polymerase II subunit RPB9

6

8

Small-scale

0.722

High

757163

IWR1
RNA polymerase II nuclear localization protein IWR1

5

1

Small-scale

0.712

High

650290

SPT5
Transcription elongation factor SPT5

5

1

Small-scale

0.706

High

593231

RPAB2
DNA-directed RNA polymerases I, II, and III subunit RPABC2

4

4

Small-scale

0.683

High

604679

RPAB5
DNA-directed RNA polymerases I, II, and III subunit RPABC5

4

4

Small-scale

0.683

High

757161

ASR1
Alcohol-sensitive RING finger protein 1

4

0

Small-scale

0.657

High

757138

T2FA
Transcription initiation factor IIF subunit alpha

4

0

Small-scale

0.653

High

715680

TAF14
Transcription initiation factor TFIID subunit 14

4

0

Small-scale

0.648

High

757133

RTR1
RNA polymerase II subunit B1 CTD phosphatase RTR1

3

2

Small-scale

0.640

High

757136

RPAB4
DNA-directed RNA polymerases I, II, and III subunit RPABC4

3

3

Small-scale

0.640

High

757160

CDC73
Cell division control protein 73

3

0

Small-scale

0.623

High

701326

SPT4
Transcription elongation factor SPT4

3

0

Small-scale

0.613

High

757140

SET2
Histone-lysine N-methyltransferase, H3 lysine-36 specific

3

0

Small-scale

0.613

High

757141

GPN1
GPN-loop GTPase 1

4

7

Small-scale

0.612

High

619142

SPT6
Transcription elongation factor SPT6

2

1

Small-scale

0.584

High

662200

TF2B
Transcription initiation factor IIB

2

5

High-throughput

0.584

High

757158

IWS1
Transcription factor SPN1

2

0

High-throughput

0.576

High

693537

MED17
Mediator of RNA polymerase II transcription subunit 17

2

0

Small-scale

0.547

High

412747

KAPA
cAMP-dependent protein kinase type 1

1

1

High-throughput

0.536

High

412980

KAPB
cAMP-dependent protein kinase type 2

1

1

High-throughput

0.536

High

757132

RSP5
E3 ubiquitin-protein ligase RSP5

1

4

High-throughput

0.536

High

425468

TFS2
Transcription elongation factor S-II

1

5

High-throughput

0.515

High

618833

PP2A2
Serine/threonine-protein phosphatase PP2A-2 catalytic subunit

1

0

High-throughput

0.513

High

757135

RAD26
DNA repair and recombination protein RAD26

1

1

Small-scale

0.501

High

757150

ULP1
Ubiquitin-like-specific protease 1

1

1

High-throughput

0.481

High

407044

RS3
Small ribosomal subunit protein uS3

1

1

High-throughput

0.479

High

663862

TF3B
Transcription factor IIIB 70 kDa subunit

1

5

High-throughput

0.479

High

698799

GSP1
GTP-binding nuclear protein GSP1/CNR1

1

2

High-throughput

0.479

High

731915

ELF1
Transcription elongation factor 1

1

1

High-throughput

0.479

High

757148

SEN1
Helicase SEN1

1

2

High-throughput

0.479

High

757149

MCE1
mRNA-capping enzyme subunit alpha

1

1

High-throughput

0.479

High

757151

TOM1
E3 ubiquitin-protein ligase TOM1

1

4

High-throughput

0.479

High

757154

RBA50
RNA polymerase II-associated protein RBA50

1

3

High-throughput

0.479

High

757155

POB3
FACT complex subunit POB3

1

1

High-throughput

0.479

High

757157

MMS22
E3 ubiquitin-protein ligase substrate receptor MMS22

1

1

High-throughput

0.479

High

381546

GAL4
Regulatory protein GAL4

1

0

Small-scale

0.460

High

692782

SPT16
FACT complex subunit SPT16

1

0

High-throughput

0.458

High

693921

MED18
Mediator of RNA polymerase II transcription subunit 18

1

0

Small-scale

0.458

High

757134

ATAD2
ATPase histone chaperone YTA7

1

0

High-throughput

0.458

High

757147

H3
Histone H3

1

0

Small-scale

0.458

High

757152

SCC2
Sister chromatid cohesion protein 2

1

0

High-throughput

0.458

High

757164

SIZ2
E3 SUMO-protein ligase SIZ2

1

0

High-throughput

0.458

High

697083

RAD23
UV excision repair protein RAD23

1

2

High-throughput

0.437

High

752451

RS20
Small ribosomal subunit protein uS10

1

1

High-throughput

0.437

High

757146

GIS2
Zinc finger protein GIS2

1

2

High-throughput

0.437

High

757159

GPN3
GPN-loop GTPase 3

1

7

Small-scale

0.437

High

757162

VAM6
Vacuolar morphogenesis protein 6

1

1

High-throughput

0.437

High

757131

CAJ1
Protein CAJ1

1

0

High-throughput

0.426

High

478184

HSP77
Import motor subunit, mitochondrial

1

3

High-throughput

0.407

High

731104

LHS1
Heat shock protein 70 homolog LHS1

1

2

High-throughput

0.407

High

757137

EMC5
ER membrane protein complex subunit 5

1

0

High-throughput

0.282

High

757144

IMDH4
Inosine-5'-monophosphate dehydrogenase 4

1

0

High-throughput

0.282

High

757156

ERP1
Protein ERP1

1

0

High-throughput

0.282

High

757145

BRE5
UBP3-associated protein BRE5

1

0

High-throughput

0.279

Low

748801

YB9F
Uncharacterized protein YBR259W

1

0

High-throughput

0.269

Low

140444

CET1
mRNA-capping enzyme subunit beta

1

0

High-throughput

0.249

Low

757143

VATG
V-type proton ATPase subunit G

1

0

High-throughput

0.249

Low

757153

GPI19
Phosphatidylinositol N-acetylglucosaminyltransferase subunit GPI19

1

0

High-throughput

0.238

Low

757142

HLJ1
Protein HLJ1

1

0

High-throughput

0.232

Low


Service provided by Combinatics, Japan

Last updated: 15 Jul 2024