HitPredict - High confidence protein-protein interactions

Download interactions: TXT MITAB-2.5

Interaction	Interactor	Experiments	Homologs	Category	Interaction Score	Confidence
692920	SPT16 FACT complex subunit SPT16	26	6	Small-scale	0.991	High
392198	H2A1 Histone H2A.1	7	11	Small-scale	0.963	High
902054	H3 Histone H3	8	7	Small-scale	0.960	High
355634	H2B1 Histone H2B.1	7	9	Small-scale	0.960	High
356709	H4 Histone H4	7	3	Small-scale	0.956	High
392564	H2A2 Histone H2A.2	4	11	Small-scale	0.881	High
356009	H2B2 Histone H2B.2	2	9	High-throughput	0.776	High
697435	CHD1 Chromo domain-containing protein 1	8	7	Small-scale	0.747	High
750634	LEO1 RNA polymerase-associated protein LEO1	7	1	Small-scale	0.744	High
675559	MCM4 DNA replication licensing factor MCM4	7	10	Small-scale	0.741	High
979845	POB3 FACT complex subunit POB3	2	1	High-throughput	0.737	High
979872	H2AZ Histone H2A.Z	2	11	High-throughput	0.737	High
976272	SLD5 DNA replication complex GINS protein SLD5	6	1	Small-scale	0.721	High
667631	MCM2 DNA replication licensing factor MCM2	4	7	Small-scale	0.689	High
858840	RTF1 RNA polymerase-associated protein RTF1	4	1	Small-scale	0.687	High
550117	CSK21 Casein kinase II subunit alpha	7	4	Small-scale	0.679	High
558249	RPB3 DNA-directed RNA polymerase II subunit RPB3	4	1	Small-scale	0.676	High
650385	SPT5 Transcription elongation factor SPT5	4	2	Small-scale	0.676	High
772331	ATAD2 ATPase histone chaperone YTA7	4	1	Small-scale	0.672	High
749004	PAF1 RNA polymerase II-associated protein 1	6	2	Small-scale	0.667	High
953685	CTR9 RNA polymerase-associated protein CTR9	5	3	Small-scale	0.648	High
526865	DPOLA DNA polymerase alpha catalytic subunit A	5	3	Small-scale	0.647	High
584793	CSK22 Casein kinase II subunit alpha'	5	4	Small-scale	0.645	High
757961	CSK2C Casein kinase II subunit beta'	5	2	Small-scale	0.645	High
607339	RFA1 Replication factor A protein 1	2	1	Small-scale	0.634	High
619169	SPT6 Transcription elongation factor SPT6	3	2	High-throughput	0.633	High
798382	CSK2B Casein kinase II subunit beta	4	2	Small-scale	0.619	High
420166	TOP2 DNA topoisomerase 2	2	4	High-throughput	0.601	High
457071	SWI6 Regulatory protein SWI6	2	1	Small-scale	0.601	High
979854	CDC73 Cell division control protein 73	3	1	Small-scale	0.593	High
770110	RT106 Histone chaperone RTT106	1	0	Small-scale	0.586	High
375500	RPB1 DNA-directed RNA polymerase II subunit RPB1	2	3	High-throughput	0.584	High
701345	SPT4 Transcription elongation factor SPT4	2	1	High-throughput	0.584	High
979870	CMR1 DNA damage-binding protein CMR1	2	6	High-throughput	0.584	High
667891	MCM5 Minichromosome maintenance protein 5	2	9	High-throughput	0.571	High
696253	STH1 Nuclear protein STH1/NPS1	2	8	High-throughput	0.571	High
744910	ISW1 ISWI chromatin-remodeling complex ATPase ISW1	2	9	High-throughput	0.571	High
797945	RSC8 Chromatin structure-remodeling complex protein RSC8	2	2	High-throughput	0.571	High
730916	CENPA Histone H3-like centromeric protein CSE4	1	7	High-throughput	0.553	High
635530	RSC6 Chromatin structure-remodeling complex protein RSC6	2	0	High-throughput	0.547	High
698684	RSC7 Chromatin structure-remodeling complex subunit RSC7	2	0	High-throughput	0.547	High
974753	RSC9 Chromatin structure-remodeling complex subunit RSC9	2	0	High-throughput	0.547	High
977994	RUVB1 RuvB-like protein 1	2	0	High-throughput	0.547	High
979857	RSC58 Chromatin structure-remodeling complex protein RSC58	2	0	High-throughput	0.547	High
960005	SEN1 Helicase SEN1	2	3	Small-scale	0.533	High
388127	TOP1 DNA topoisomerase 1	1	3	High-throughput	0.515	High
769427	SSB2 Ribosome-associated molecular chaperone SSB2	2	2	High-throughput	0.504	High
514210	NHP6A Non-histone chromosomal protein 6A	1	5	Small-scale	0.501	High
865231	TOF1 Topoisomerase 1-associated factor 1	1	1	Small-scale	0.501	High
533950	INO4 Protein INO4	1	0	High-throughput	0.493	High
627685	NAP1 Nucleosome assembly protein	1	0	High-throughput	0.493	High
860496	ENV11 Late endosome and vacuole interface protein 11	1	0	High-throughput	0.493	High
512669	SSB1 Ribosome-associated molecular chaperone SSB1	1	2	High-throughput	0.489	High
748556	ARPC1 Actin-related protein 2/3 complex subunit 1	1	5	High-throughput	0.489	High
440096	RPB2 DNA-directed RNA polymerase II subunit RPB2	1	2	High-throughput	0.479	High
593186	RPAB1 DNA-directed RNA polymerases I, II, and III subunit RPABC1	1	1	High-throughput	0.479	High
602378	DPOE DNA polymerase epsilon catalytic subunit A	1	3	Small-scale	0.479	High
606753	RPC2 DNA-directed RNA polymerase III subunit RPC2	1	2	High-throughput	0.479	High
628451	SIS1 Protein SIS1	1	1	High-throughput	0.479	High
628896	SWI4 Regulatory protein SWI4	1	1	Small-scale	0.479	High
663915	TF3B Transcription factor IIIB 70 kDa subunit	1	1	High-throughput	0.479	High
687747	BTAF1 TATA-binding protein-associated factor MOT1	1	8	Small-scale	0.479	High
728756	BDF1 Bromodomain-containing factor 1	1	11	High-throughput	0.479	High
744792	MCM7 DNA replication licensing factor MCM7	1	8	High-throughput	0.479	High
757155	RPB11 DNA-directed RNA polymerase II subunit RPB11	1	1	High-throughput	0.479	High
810359	SET2 Histone-lysine N-methyltransferase, H3 lysine-36 specific	1	4	High-throughput	0.479	High
859017	MCM6 DNA replication licensing factor MCM6	1	10	Small-scale	0.479	High
964869	CTF4 DNA polymerase alpha-binding protein	1	7	High-throughput	0.479	High
970401	ADA2 Transcriptional adapter 2	1	2	High-throughput	0.479	High
978703	CAC2 Chromatin assembly factor 1 subunit p60	1	6	Small-scale	0.479	High
979848	SFH1 Chromatin structure-remodeling complex subunit SFH1	1	1	High-throughput	0.479	High
979855	BDF2 Bromodomain-containing factor 2	1	9	High-throughput	0.479	High
979859	YNG1 Protein YNG1	1	2	Small-scale	0.479	High
979861	ELG1 Telomere length regulation protein ELG1	1	4	Small-scale	0.479	High
979863	YL11B Transposon Ty1-LR1 Gag-Pol polyprotein	1	1	High-throughput	0.479	High
593264	RPAB2 DNA-directed RNA polymerases I, II, and III subunit RPABC2	1	0	High-throughput	0.458	High
593343	RPAB3 DNA-directed RNA polymerases I, II, and III subunit RPABC3	1	0	High-throughput	0.458	High
604715	RPAB5 DNA-directed RNA polymerases I, II, and III subunit RPABC5	1	0	High-throughput	0.458	High
644825	RFA3 Replication factor A protein 3	1	0	High-throughput	0.458	High
751451	NSE2 E3 SUMO-protein ligase MMS21	1	0	Small-scale	0.458	High
979866	SIZ2 E3 SUMO-protein ligase SIZ2	1	0	High-throughput	0.458	High
979869	ARP7 Actin-related protein 7	1	0	High-throughput	0.458	High
733304	SET3 SET domain-containing protein 3	1	5	High-throughput	0.445	High
969415	RSC4 Chromatin structure-remodeling complex subunit RSC4	1	9	High-throughput	0.445	High
979846	ARP9 Actin-like protein ARP9	1	1	High-throughput	0.445	High
979873	YN12B Transposon Ty1-NL2 Gag-Pol polyprotein	1	1	High-throughput	0.445	High
593087	RPB4 DNA-directed RNA polymerase II subunit RPB4	1	1	High-throughput	0.437	High
638852	SPB4 ATP-dependent rRNA helicase SPB4	1	4	High-throughput	0.437	High
663269	TF2B Transcription initiation factor IIB	1	1	High-throughput	0.437	High
710032	RPB7 DNA-directed RNA polymerase II subunit RPB7	1	1	High-throughput	0.437	High
710451	SAS3 Histone acetyltransferase SAS3	1	2	High-throughput	0.437	High
742990	GBLP Small ribosomal subunit protein RACK1	1	4	Small-scale	0.437	High
866459	APJ1 J domain-containing protein APJ1	1	3	High-throughput	0.437	High
979850	IWS1 Transcription factor SPN1	1	1	High-throughput	0.437	High
979856	SUB2 ATP-dependent RNA helicase SUB2	1	6	Small-scale	0.437	High
979867	NTO1 NuA3 HAT complex component NTO1	1	5	High-throughput	0.437	High
979871	PDP1 [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial	1	1	High-throughput	0.437	High
691344	NGG1 Chromatin-remodeling complexes subunit NGG1	1	0	High-throughput	0.426	High
861537	RT102 Regulator of Ty1 transposition protein 102	1	0	High-throughput	0.426	High
979852	RSC3 Chromatin structure-remodeling complex protein RSC3	1	0	High-throughput	0.426	High
361026	TBB Tubulin beta chain	1	1	High-throughput	0.407	High
368393	EF1A Elongation factor 1-alpha	1	1	High-throughput	0.407	High
492383	HSP71 Heat shock protein SSA1	1	2	High-throughput	0.407	High
494919	HSP72 Heat shock protein SSA2	1	2	High-throughput	0.407	High
629043	SCJ1 DnaJ-related protein SCJ1	1	1	High-throughput	0.407	High
696061	HSP79 Heat shock protein homolog SSE2	1	3	High-throughput	0.407	High
761304	CAJ1 Protein CAJ1	1	1	High-throughput	0.407	High
766202	HSP7E Heat shock protein SSC3, mitochondrial	1	2	High-throughput	0.407	High
865495	JJJ1 J protein JJJ1	1	3	High-throughput	0.407	High
961486	CDC14 Tyrosine-protein phosphatase CDC14	1	2	High-throughput	0.407	High
979865	PSH1 RING finger protein PSH1	5	0	Small-scale	0.367	High
979849	YL455 PWWP domain-containing protein YLR455W	2	0	Small-scale	0.318	High
979853	VIP1 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase	2	0	High-throughput	0.313	High
979864	SCC1 Sister chromatid cohesion protein 1	1	0	Small-scale	0.279	Low
561065	EF3A Elongation factor 3A	1	0	High-throughput	0.269	Low
659124	CAPZA F-actin-capping protein subunit alpha	1	0	High-throughput	0.269	Low
728883	OSH1 Oxysterol-binding protein homolog 1	1	0	High-throughput	0.269	Low
762194	ATC3 Phospholipid-transporting ATPase DRS2	1	0	High-throughput	0.269	Low
809524	TRS85 Trafficking protein particle complex III-specific subunit 85	1	0	High-throughput	0.269	Low
977494	PML39 Pre-mRNA leakage protein 39	1	0	High-throughput	0.269	Low
979851	BSP1 Protein BSP1	1	0	High-throughput	0.269	Low
979858	HRD1 ERAD-associated E3 ubiquitin-protein ligase HRD1	1	0	High-throughput	0.269	Low
636081	CSM1 Monopolin complex subunit CSM1	1	0	Small-scale	0.261	Low
140452	CET1 mRNA-capping enzyme subunit beta	1	0	Small-scale	0.249	Low
337180	HIS1 ATP phosphoribosyltransferase	1	0	High-throughput	0.249	Low
436847	SWI5 Transcriptional factor SWI5	1	0	Small-scale	0.249	Low
524446	CAF20 Cap-associated protein CAF20	1	0	High-throughput	0.249	Low
527058	TBP TATA-box-binding protein	1	0	High-throughput	0.249	Low
655579	RPB9 DNA-directed RNA polymerase II subunit RPB9	1	0	High-throughput	0.249	Low
698936	GSP1 GTP-binding nuclear protein GSP1/CNR1	1	0	High-throughput	0.249	Low
706947	HIS5 Imidazole glycerol phosphate synthase hisHF	1	0	High-throughput	0.249	Low
731930	ELF1 Transcription elongation factor 1	1	0	High-throughput	0.249	Low
737216	LONM Lon protease homolog, mitochondrial	1	0	High-throughput	0.249	Low
979847	MMS22 E3 ubiquitin-protein ligase substrate receptor MMS22	1	0	High-throughput	0.249	Low
979860	SGO1 Shugoshin	1	0	High-throughput	0.249	Low
979862	IOC2 ISWI one complex protein 2	1	0	High-throughput	0.249	Low
340273	KPYK1 Pyruvate kinase 1	1	0	High-throughput	0.232	Low
556291	VATB V-type proton ATPase subunit B	1	0	High-throughput	0.232	Low
705633	HSP78 Heat shock protein 78, mitochondrial	1	0	High-throughput	0.232	Low
760951	TCPD T-complex protein 1 subunit delta	1	0	High-throughput	0.232	Low
810729	NET1 Nucleolar protein NET1	1	0	High-throughput	0.232	Low
979868	JID1 J domain-containing protein 1	1	0	High-throughput	0.232	Low