Protein: SMD1
Small nuclear ribonucleoprotein Sm D1 (Sm-D1) (snRNP core protein D1)

Gene: SMD1
Organism: Schizosaccharomyces pombe 972h-
Interactions: 25
UniProt ID: O42661

Gene Ontology (top 5):
GO:0000243 - commitment complex
GO:0000387 - spliceosomal snRNP assembly
GO:0000395 - mRNA 5'-splice site recognition
GO:0003723 - RNA binding
GO:0003729 - mRNA binding

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

142871

ICLN
Splicing factor saf5

3

1

Small-scale

0.858

High

193901

SN114
Pre-mRNA-splicing factor cwf10

2

12

Small-scale

0.737

High

193903

CEF1
Pre-mRNA-splicing factor cdc5

3

9

Small-scale

0.624

High

193912

RU2A
U2 small nuclear ribonucleoprotein A'

1

10

High-throughput

0.618

High

143343

RU17
U1 small nuclear ribonucleoprotein 70 kDa homolog

1

20

Small-scale

0.575

High

144076

PRP19
Pre-mRNA-processing factor 19

1

20

High-throughput

0.536

High

193899

PRP17
Pre-mRNA-processing factor 17

1

20

High-throughput

0.536

High

193905

CWC2
Pre-mRNA-splicing factor cwf2

1

9

High-throughput

0.536

High

193906

DRE4
Pre-mRNA-splicing factor dre4

1

7

High-throughput

0.536

High

193911

YLK3
Uncharacterized protein C1782.03

1

2

High-throughput

0.536

High

193910

YK24
Uncharacterized protein C140.04

1

0

Small-scale

0.513

High

193904

YGNB
Putative nucleosome assembly protein C2D10.11C

1

2

High-throughput

0.481

High

140490

PHD1
Histone deacetylase phd1

1

1

High-throughput

0.479

High

142650

NAB2
Nuclear polyadenylated RNA-binding protein nab2

1

1

Small-scale

0.479

High

142751

YF28
Uncharacterized protein C17A2.08c

1

1

High-throughput

0.479

High

143007

YE02
Uncharacterized helicase C17H9.02

1

17

High-throughput

0.479

High

144383

SDE2
Splicing regulator sde2

1

1

Small-scale

0.479

High

193900

YBJC
Zinc finger CCCH domain-containing protein C337.12

1

2

High-throughput

0.479

High

193902

PIR2
NURS complex subunit pir2

1

1

High-throughput

0.479

High

193907

PRP1
Pre-mRNA-splicing factor prp1

1

17

Small-scale

0.479

High

193908

YK99
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09

1

9

High-throughput

0.479

High

193909

YK96
Uncharacterized protein C20H4.06c

1

3

High-throughput

0.479

High

193913

BRR2
Pre-mRNA-splicing factor brr2

1

20

High-throughput

0.479

High

193914

YKR3
G-patch domain-containing protein C1486.03

1

10

High-throughput

0.479

High

193915

RED1
NURS complex subunit red1

1

1

High-throughput

0.479

High


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Last updated: 15 Jul 2024