Protein: RSC58
Chromatin structure-remodeling complex protein RSC58 (Remodel the structure of chromatin complex subunit 58)

Gene: RSC58
Organism: Saccharomyces cerevisiae S288C
Interactions: 153
UniProt ID: Q07979

Gene Ontology (top 5):
GO:0000785 - chromatin
GO:0000978 - RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634 - nucleus
GO:0006337 - nucleosome disassembly

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

696264

STH1
Nuclear protein STH1/NPS1

11

2

Small-scale

0.977

High

987570

RSC2
Chromatin structure-remodeling complex subunit RSC2

11

4

Small-scale

0.974

High

969430

RSC4
Chromatin structure-remodeling complex subunit RSC4

8

5

Small-scale

0.966

High

860450

RSC1
Chromatin structure-remodeling complex subunit RSC1

6

6

Small-scale

0.938

High

993143

RSC58
Chromatin structure-remodeling complex protein RSC58

3

0

High-throughput

0.804

High

728772

BDF1
Bromodomain-containing factor 1

2

3

High-throughput

0.737

High

988511

RSC3
Chromatin structure-remodeling complex protein RSC3

6

1

High-throughput

0.732

High

993155

ARP7
Actin-related protein 7

6

1

High-throughput

0.732

High

983298

ARP9
Actin-like protein ARP9

6

1

High-throughput

0.729

High

797962

RSC8
Chromatin structure-remodeling complex protein RSC8

8

0

Small-scale

0.716

High

635537

RSC6
Chromatin structure-remodeling complex protein RSC6

7

0

Small-scale

0.713

High

698693

RSC7
Chromatin structure-remodeling complex subunit RSC7

6

0

High-throughput

0.701

High

974763

RSC9
Chromatin structure-remodeling complex subunit RSC9

6

0

High-throughput

0.701

High

861543

RT102
Regulator of Ty1 transposition protein 102

6

0

High-throughput

0.699

High

744919

ISW1
ISWI chromatin-remodeling complex ATPase ISW1

4

1

High-throughput

0.687

High

392589

H2A2
Histone H2A.2

5

0

High-throughput

0.679

High

986313

SFH1
Chromatin structure-remodeling complex subunit SFH1

5

0

Small-scale

0.679

High

993161

HTL1
High temperature lethal protein 1

5

0

High-throughput

0.676

High

754264

RSC30
Chromatin structure-remodeling complex protein RSC30

3

1

High-throughput

0.650

High

356758

H4
Histone H4

4

0

Small-scale

0.648

High

902107

H3
Histone H3

4

0

Small-scale

0.648

High

772349

ATAD2
ATPase histone chaperone YTA7

4

0

Small-scale

0.643

High

991241

BDF2
Bromodomain-containing factor 2

1

1

High-throughput

0.618

High

514274

NHP6B
Non-histone chromosomal protein 6B

2

1

High-throughput

0.588

High

457079

SWI6
Regulatory protein SWI6

2

1

Small-scale

0.576

High

975981

GCN5
Histone acetyltransferase GCN5

1

1

High-throughput

0.575

High

355671

H2B1
Histone H2B.1

2

1

High-throughput

0.571

High

356032

H2B2
Histone H2B.2

2

1

High-throughput

0.571

High

687757

BTAF1
TATA-binding protein-associated factor MOT1

2

3

Small-scale

0.571

High

495114

HSP72
Heat shock protein SSA2

2

1

High-throughput

0.552

High

527070

TBP
TATA-box-binding protein

2

0

High-throughput

0.547

High

692945

SPT16
FACT complex subunit SPT16

2

0

High-throughput

0.547

High

716371

SPT10
Protein SPT10

2

0

High-throughput

0.547

High

746461

LDB7
Chromatin structure-remodeling complex protein RSC14

2

0

High-throughput

0.547

High

979857

POB3
FACT complex subunit POB3

2

0

High-throughput

0.547

High

993148

IOC2
ISWI one complex protein 2

2

0

High-throughput

0.547

High

689973

ASF1
Histone chaperone ASF1

1

0

High-throughput

0.546

High

512955

SSB1
Ribosome-associated molecular chaperone SSB1

2

0

High-throughput

0.528

High

548624

IDI1
Isopentenyl-diphosphate delta-isomerase

1

0

High-throughput

0.518

High

974214

UME1
Transcriptional regulatory protein UME1

1

0

High-throughput

0.518

High

993150

SIZ2
E3 SUMO-protein ligase SIZ2

1

0

High-throughput

0.513

High

407357

RS3
Small ribosomal subunit protein uS3

1

0

High-throughput

0.458

High

420178

TOP2
DNA topoisomerase 2

1

0

High-throughput

0.458

High

558289

RPB3
DNA-directed RNA polymerase II subunit RPB3

1

0

High-throughput

0.458

High

663489

TF2B
Transcription initiation factor IIB

1

0

High-throughput

0.458

High

688459

RPC3
DNA-directed RNA polymerase III subunit RPC3

1

0

High-throughput

0.458

High

693568

MED17
Mediator of RNA polymerase II transcription subunit 17

1

0

Small-scale

0.458

High

698962

GSP1
GTP-binding nuclear protein GSP1/CNR1

1

0

High-throughput

0.458

High

715743

TAF14
Transcription initiation factor TFIID subunit 14

1

0

Small-scale

0.458

High

743026

GBLP
Small ribosomal subunit protein RACK1

1

0

Small-scale

0.458

High

746082

UBP13
Ubiquitin carboxyl-terminal hydrolase 13

1

0

High-throughput

0.458

High

775881

DSN1
Kinetochore-associated protein DSN1

1

0

High-throughput

0.458

High

809618

FYV8
Protein FYV8

1

0

High-throughput

0.458

High

865853

CBK1
Serine/threonine-protein kinase CBK1

1

0

High-throughput

0.458

High

987054

TFC6
Transcription factor tau 91 kDa subunit

1

0

High-throughput

0.458

High

991280

BRE1
E3 ubiquitin-protein ligase BRE1

1

0

High-throughput

0.458

High

993144

MED7
Mediator of RNA polymerase II transcription subunit 7

1

0

Small-scale

0.458

High

993145

SGO1
Shugoshin

1

0

High-throughput

0.458

High

993149

SCC1
Sister chromatid cohesion protein 1

1

0

High-throughput

0.458

High

993151

SMT3
Ubiquitin-like protein SMT3

1

0

High-throughput

0.458

High

993158

CMR1
DNA damage-binding protein CMR1

1

0

High-throughput

0.458

High

993160

SMC6
Structural maintenance of chromosomes protein 6

1

0

High-throughput

0.458

High

492620

HSP71
Heat shock protein SSA1

1

1

High-throughput

0.445

High

514217

NHP6A
Non-histone chromosomal protein 6A

1

1

High-throughput

0.445

High

622197

MCM3
DNA replication licensing factor MCM3

1

2

High-throughput

0.445

High

628903

SWI4
Regulatory protein SWI4

1

1

High-throughput

0.445

High

667639

MCM2
DNA replication licensing factor MCM2

1

2

High-throughput

0.445

High

667898

MCM5
Minichromosome maintenance protein 5

1

2

High-throughput

0.445

High

695652

HSP7F
Heat shock protein homolog SSE1

1

2

High-throughput

0.445

High

707000

MSN2
Zinc finger protein MSN2

1

1

High-throughput

0.445

High

707061

MSN4
Zinc finger protein MSN4

1

1

High-throughput

0.445

High

859025

MCM6
DNA replication licensing factor MCM6

1

1

High-throughput

0.445

High

859283

INO80
Chromatin-remodeling ATPase INO80

1

2

High-throughput

0.445

High

978025

RUVB1
RuvB-like protein 1

1

1

High-throughput

0.445

High

983746

SWR1
Helicase SWR1

1

1

High-throughput

0.445

High

993154

ARP8
Actin-like protein ARP8

1

1

High-throughput

0.445

High

993156

RUVB2
RuvB-like protein 2

1

1

High-throughput

0.445

High

993159

H2AZ
Histone H2A.Z

1

1

High-throughput

0.445

High

755936

YHS2
MIP18 family protein YHR122W

1

0

High-throughput

0.438

High

334823

G3P3
Glyceraldehyde-3-phosphate dehydrogenase 3

1

0

High-throughput

0.426

High

375524

RPB1
DNA-directed RNA polymerase II subunit RPB1

1

0

High-throughput

0.426

High

419398

HAP2
Transcriptional activator HAP2

1

0

High-throughput

0.426

High

515090

MCM1
Pheromone receptor transcription factor

1

0

High-throughput

0.426

High

516327

RAP1
DNA-binding protein RAP1

1

0

High-throughput

0.426

High

609148

SIN3
Transcriptional regulatory protein SIN3

1

0

High-throughput

0.426

High

628527

SIS1
Protein SIS1

1

0

High-throughput

0.426

High

650406

SPT5
Transcription elongation factor SPT5

1

0

High-throughput

0.426

High

689298

SP110
Spindle pole body component 110

1

0

High-throughput

0.426

High

690890

HIR2
Protein HIR2

1

0

High-throughput

0.426

High

697445

CHD1
Chromo domain-containing protein 1

1

0

High-throughput

0.426

High

697669

T2AG
Transcription initiation factor IIA subunit 2

1

0

High-throughput

0.426

High

710453

SAS3
Histone acetyltransferase SAS3

1

0

High-throughput

0.426

High

733316

SET3
SET domain-containing protein 3

1

0

High-throughput

0.426

High

744705

TAF5
Transcription initiation factor TFIID subunit 5

1

0

High-throughput

0.426

High

755464

TRA1
Transcription-associated protein 1

1

0

High-throughput

0.426

High

755985

YHS7
Uncharacterized protein YHR127W

1

0

High-throughput

0.426

High

757358

FKBP3
Peptidyl-prolyl cis-trans isomerase

1

0

High-throughput

0.426

High

757477

SPT8
Transcription factor SPT8

1

0

High-throughput

0.426

High

770113

RT106
Histone chaperone RTT106

1

0

High-throughput

0.426

High

797760

IOC3
ISWI one complex protein 3

1

0

High-throughput

0.426

High

858576

TAF6
Transcription initiation factor TFIID subunit 6

1

0

High-throughput

0.426

High

862744

H1
Histone H1

1

0

High-throughput

0.426

High

866519

APJ1
J domain-containing protein APJ1

1

0

High-throughput

0.426

High

887695

ACT
Actin

1

0

High-throughput

0.426

High

961500

CDC14
Tyrosine-protein phosphatase CDC14

1

0

High-throughput

0.426

High

970985

TBF1
Protein TBF1

1

0

High-throughput

0.426

High

973833

HOS3
Histone deacetylase HOS3

1

0

High-throughput

0.426

High

977533

TAF12
Transcription initiation factor TFIID subunit 12

1

0

High-throughput

0.426

High

982935

TRI1
Protein TRI1

1

0

High-throughput

0.426

High

982947

TAF9
Transcription initiation factor TFIID subunit 9

1

0

High-throughput

0.426

High

987040

EAF1
Chromatin modification-related protein EAF1

1

0

High-throughput

0.426

High

987597

IWS1
Transcription factor SPN1

1

0

High-throughput

0.426

High

993147

TAF10
Transcription initiation factor TFIID subunit 10

1

0

High-throughput

0.426

High

993152

NTO1
NuA3 HAT complex component NTO1

1

0

High-throughput

0.426

High

993153

IES3
Ino eighty subunit 3

1

0

High-throughput

0.426

High

993157

RLF2
Chromatin assembly factor 1 subunit p90

1

0

High-throughput

0.426

High

772468

ALG5
Dolichyl-phosphate beta-glucosyltransferase

1

0

High-throughput

0.282

High

797729

UBP6
Ubiquitin carboxyl-terminal hydrolase 6

1

0

High-throughput

0.282

High

988684

VIP1
Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase

1

0

High-throughput

0.279

Low

141550

RS9A
Small ribosomal subunit protein uS4A

1

0

High-throughput

0.249

Low

358285

RS17A
Small ribosomal subunit protein eS17A

1

0

High-throughput

0.249

Low

383378

RL25
Large ribosomal subunit protein uL23

1

0

High-throughput

0.249

Low

405858

RL26A
Large ribosomal subunit protein uL24A

1

0

High-throughput

0.249

Low

408153

RS13
Small ribosomal subunit protein uS15

1

0

High-throughput

0.249

Low

426179

RS19A
Small ribosomal subunit protein eS19A

1

0

High-throughput

0.249

Low

472421

RL31A
Large ribosomal subunit protein eL31A

1

0

High-throughput

0.249

Low

480346

RS6A
Small ribosomal subunit protein eS6A

1

0

High-throughput

0.249

Low

480914

RS8A
Small ribosomal subunit protein eS8A

1

0

High-throughput

0.249

Low

482486

RS18A
Small ribosomal subunit protein uS13A

1

0

High-throughput

0.249

Low

632119

RS2
Small ribosomal subunit protein uS5

1

0

High-throughput

0.249

Low

645683

RS7A
Small ribosomal subunit protein eS7A

1

0

High-throughput

0.249

Low

700655

RSSA1
Small ribosomal subunit protein uS2A

1

0

High-throughput

0.249

Low

701121

SMY2
Protein SMY2

1

0

High-throughput

0.249

Low

730146

RS27A
Small ribosomal subunit protein eS27A

1

0

High-throughput

0.249

Low

752699

RS20
Small ribosomal subunit protein uS10

1

0

High-throughput

0.249

Low

820204

RS12
Small ribosomal subunit protein eS12

1

0

High-throughput

0.249

Low

967791

RS15
Small ribosomal subunit protein uS19

1

0

High-throughput

0.249

Low

993146

RS10A
Small ribosomal subunit protein eS10A

1

0

High-throughput

0.249

Low

953544

YD413
Putative uncharacterized protein YDR413C

1

0

High-throughput

0.238

Low

969235

UBC7
Ubiquitin-conjugating enzyme E2 7

1

0

High-throughput

0.238

Low

140801

FOB1
DNA replication fork-blocking protein FOB1

1

0

High-throughput

0.232

Low

333923

ADH1
Alcohol dehydrogenase 1

1

0

High-throughput

0.232

Low

340297

KPYK1
Pyruvate kinase 1

1

0

High-throughput

0.232

Low

340753

PGK
Phosphoglycerate kinase

1

0

High-throughput

0.232

Low

343027

ENO2
Enolase 2

1

0

High-throughput

0.232

Low

424744

PYR1
Multifunctional protein URA2

1

0

High-throughput

0.232

Low

556335

VATB
V-type proton ATPase subunit B

1

0

High-throughput

0.232

Low

760700

TCPB
T-complex protein 1 subunit beta

1

0

High-throughput

0.232

Low

761096

TCPZ
T-complex protein 1 subunit zeta

1

0

High-throughput

0.232

Low

764899

SNF7
Vacuolar-sorting protein SNF7

1

0

High-throughput

0.232

Low

775680

DJP1
DnaJ-like protein 1

1

0

High-throughput

0.232

Low

810741

NET1
Nucleolar protein NET1

1

0

High-throughput

0.232

Low


Service provided by Combinatics, Japan

Last updated: 15 Jul 2024