Protein: SEB1
Rpb7-binding protein seb1

Gene: SEB1
Organism: Schizosaccharomyces pombe 972h-
Interactions: 46
UniProt ID: Q9UTE3

Gene Ontology (top 5):
GO:0003723 - RNA binding
GO:0005634 - nucleus
GO:0006369 - termination of RNA polymerase II transcription
GO:0031124 - mRNA 3'-end processing
GO:0031126 - sno(s)RNA 3'-end processing

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

968765

RPB2
DNA-directed RNA polymerase II subunit RPB2

2

2

Small-scale

0.768

High

251794

CFT1
Protein cft1

2

0

Small-scale

0.716

High

736915

RPB1
DNA-directed RNA polymerase II subunit rpb1

3

3

Small-scale

0.667

High

145822

RPB7
DNA-directed RNA polymerase II subunit rpb7

2

1

Small-scale

0.625

High

678724

PABP
Polyadenylate-binding protein, cytoplasmic and nuclear

1

1

Small-scale

0.618

High

784824

GAR2
Protein gar2

1

2

Small-scale

0.618

High

737028

DSK1
Protein kinase dsk1

1

0

High-throughput

0.614

High

815655

RPAB4
DNA-directed RNA polymerases I, II, and III subunit RPABC4

1

0

Small-scale

0.614

High

143214

YE02
Uncharacterized helicase C17H9.02

2

2

Small-scale

0.611

High

998270

RPAB1
DNA-directed RNA polymerases I, II, and III subunit RPABC1

2

1

Small-scale

0.595

High

251980

YJ03
UPF0400 protein C337.03

1

0

Small-scale

0.586

High

953231

LAH1
La protein homolog

1

0

Small-scale

0.586

High

1358112

YTH1
mRNA 3'-end-processing protein yth1

1

0

Small-scale

0.586

High

142964

YSH1
Endoribonuclease ysh1

2

1

Small-scale

0.584

High

145126

RNA14
mRNA 3'-end-processing protein rna14

2

2

Small-scale

0.584

High

251805

CFT2
Cleavage factor two protein 2

2

1

Small-scale

0.584

High

1013695

PTA1
mRNA cleavage and polyadenylation specificity factor complex subunit pta1

2

0

Small-scale

0.559

High

142723

NOP12
Nucleolar protein 12

1

2

Small-scale

0.553

High

1350875

RPA2
Probable DNA-directed RNA polymerase I subunit RPA2

1

2

Small-scale

0.553

High

1358116

RED1
NURS complex subunit red1

1

0

Small-scale

0.513

High

252117

RPB4
DNA-directed RNA polymerase II subunit rpb4

1

1

Small-scale

0.501

High

741623

RPB3
DNA-directed RNA polymerase II subunit RPB3

1

1

Small-scale

0.501

High

252130

RRP5
rRNA biogenesis protein rrp5

1

2

Small-scale

0.479

High

293556

NOP56
Nucleolar protein 56

1

1

Small-scale

0.479

High

777118

XRN2
5'-3' exoribonuclease 2

1

1

Small-scale

0.479

High

880651

CLR3
Histone deacetylase clr3

1

1

Small-scale

0.479

High

1000088

HAS1
ATP-dependent RNA helicase has1

1

1

Small-scale

0.479

High

1336861

BRX1
Ribosome biogenesis protein brx1

1

1

Small-scale

0.479

High

1350854

NOP58
Nucleolar protein 58

1

1

Small-scale

0.479

High

140955

PMT3
Ubiquitin-like protein pmt3/smt3

1

0

High-throughput

0.458

High

143261

EBP2
Probable rRNA-processing protein ebp2

1

0

Small-scale

0.458

High

224171

PESC
Pescadillo homolog

1

0

Small-scale

0.458

High

251975

CLR1
Cryptic loci regulator protein 1

1

0

Small-scale

0.458

High

292850

NOP2
25S rRNA

1

0

Small-scale

0.458

High

293831

JHD1
Putative JmjC domain-containing histone demethylation protein 1

1

0

High-throughput

0.458

High

624021

DBP2
ATP-dependent RNA helicase dbp2

1

0

Small-scale

0.458

High

724311

FBRL
rRNA 2'-O-methyltransferase fibrillarin

1

0

Small-scale

0.458

High

1350715

YBEG
Uncharacterized WD repeat-containing protein C17D11.16

1

0

Small-scale

0.458

High

1350733

MIT1
Chromatin remodeling factor mit1

1

0

Small-scale

0.458

High

1358115

PFS2
Polyadenylation factor subunit 2

1

0

Small-scale

0.458

High

1358117

RPF2
Ribosome production factor 2 homolog

1

0

Small-scale

0.458

High

548211

RPA1
DNA-directed RNA polymerase I subunit rpa1

1

3

Small-scale

0.437

High

1013668

DBP3
ATP-dependent RNA helicase dbp3

1

1

Small-scale

0.437

High

144055

CBF5
H/ACA ribonucleoprotein complex subunit cbf5

1

0

Small-scale

0.249

Low

1000093

FIP1
Plasma membrane iron permease

1

0

Small-scale

0.249

Low

501593

ACT
Actin

1

0

Small-scale

0.238

Low


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Last updated: 15 Jul 2024