Protein: YBJC
Zinc finger CCCH domain-containing protein C337.12

Gene: YBJC, SPBC337.12
Organism: Schizosaccharomyces pombe 972h-
Interactions: 173
UniProt ID: O74823

Gene Ontology (top 5):
GO:0000785 - chromatin
GO:0005634 - nucleus
GO:0016604 - nuclear body
GO:0033621 - nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts
GO:0046872 - metal ion binding

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

145438

PAB2
Polyadenylate-binding protein 2

4

20

Small-scale

0.874

High

252079

YHP4
Uncharacterized RNA-binding protein C902.04

2

1

Small-scale

0.754

High

141991

PRP46
Pre-mRNA-splicing factor prp5

1

5

High-throughput

0.618

High

143977

YEC8
Uncharacterized WD repeat-containing protein C25H1.08c

1

2

High-throughput

0.618

High

223703

SLT11
Pre-mRNA-splicing factor cwf5

1

8

High-throughput

0.618

High

251400

ERB1
Ribosome biogenesis protein erb1

1

2

High-throughput

0.618

High

251404

YOCE
Uncharacterized RNA-binding protein C4F6.14

1

18

High-throughput

0.618

High

252000

CWF17
Pre-mRNA-splicing factor cwf17

1

4

High-throughput

0.618

High

252015

GAR2
Protein gar2

1

12

High-throughput

0.618

High

252018

LAH1
La protein homolog

1

11

High-throughput

0.618

High

252022

RNP24
RNA-binding protein rnp24

1

18

High-throughput

0.618

High

252027

MLO3
mRNA export protein mlo3

1

10

High-throughput

0.618

High

252055

TCG1
Single-stranded TG1-3 DNA-binding protein

1

12

High-throughput

0.618

High

252058

NCBP2
Nuclear cap-binding protein subunit 2

1

20

Small-scale

0.618

High

252065

YBEG
Uncharacterized WD repeat-containing protein C17D11.16

1

1

High-throughput

0.618

High

252077

YTM1
Ribosome biogenesis protein ytm1

1

2

High-throughput

0.618

High

252097

SA145
Pre-mRNA-splicing factor sap145

1

1

High-throughput

0.618

High

251987

MMI1
RNA binding exosome specificity factor Mmi1

3

0

Small-scale

0.613

High

252101

YGR4
Uncharacterized RNA-binding protein C365.04c

1

0

High-throughput

0.586

High

143041

YE02
Uncharacterized helicase C17H9.02

2

2

Small-scale

0.584

High

252090

RED1
NURS complex subunit red1

2

2

Small-scale

0.584

High

145286

YFPE
Uncharacterized protein C7D4.14c

2

0

Small-scale

0.559

High

251993

PIR2
NURS complex subunit pir2

2

0

Small-scale

0.559

High

142718

NOP12
Nucleolar protein 12

1

19

High-throughput

0.553

High

251989

G3BP
Putative G3BP-like protein

1

8

High-throughput

0.553

High

252028

NRD1
Negative regulator of differentiation 1

1

13

High-throughput

0.553

High

252061

UTP7
Probable U3 small nucleolar RNA-associated protein 7

1

8

High-throughput

0.553

High

140972

DED1
ATP-dependent RNA helicase ded1

1

2

High-throughput

0.479

High

144029

OLA1
Obg-like ATPase 1

1

2

High-throughput

0.479

High

144040

RFC3
Replication factor C subunit 3

1

2

High-throughput

0.479

High

144091

PRP19
Pre-mRNA-processing factor 19

1

4

High-throughput

0.479

High

144201

SMD2
Small nuclear ribonucleoprotein Sm D2

1

2

High-throughput

0.479

High

145131

NOG2
Nucleolar GTP-binding protein 2

1

3

High-throughput

0.479

High

145206

NCBP1
Nuclear cap-binding protein subunit 1

1

2

Small-scale

0.479

High

145406

YB7A
Uncharacterized AAA domain-containing protein C16E9.10c

1

2

High-throughput

0.479

High

193696

YEK9
Uncharacterized protein C4F10.09c

1

1

High-throughput

0.479

High

193900

SMD1
Small nuclear ribonucleoprotein Sm D1

1

2

High-throughput

0.479

High

194999

LSM5
U6 snRNA-associated Sm-like protein LSm5

1

2

High-throughput

0.479

High

195064

DEF1
RNA polymerase II degradation factor 1

1

2

High-throughput

0.479

High

223467

RRS1
Ribosome biogenesis regulatory protein homolog

1

3

High-throughput

0.479

High

223536

RUXF
Small nuclear ribonucleoprotein F

1

2

High-throughput

0.479

High

223689

YCO6
Putative nucleosome assembly protein C364.06

1

2

High-throughput

0.479

High

223725

VGL1
Vigilin 1

1

9

High-throughput

0.479

High

223883

DPO5
rDNA transcriptional regulator pol5

1

1

High-throughput

0.479

High

224164

PESC
Pescadillo homolog

1

1

High-throughput

0.479

High

251390

MAK5
ATP-dependent RNA helicase mak5

1

6

High-throughput

0.479

High

251719

CG1C
Cyclin pch1

1

1

High-throughput

0.479

High

251913

KRR1
KRR1 small subunit processome component homolog

1

2

High-throughput

0.479

High

251937

GRN1
GTPase grn1

1

3

High-throughput

0.479

High

251985

RRP45
Exosome complex component rrp45

1

1

High-throughput

0.479

High

251988

RUXG
Small nuclear ribonucleoprotein G

1

5

High-throughput

0.479

High

251990

NOP2
25S rRNA

1

1

High-throughput

0.479

High

251991

YH56
UPF0743 protein C215.06c

1

1

High-throughput

0.479

High

251992

SN114
Pre-mRNA-splicing factor cwf10

1

1

High-throughput

0.479

High

251996

RFC4
Replication factor C subunit 4

1

2

High-throughput

0.479

High

251997

NOP56
Nucleolar protein 56

1

2

High-throughput

0.479

High

251999

RPAC1
DNA-directed RNA polymerases I and III subunit RPAC1

1

1

High-throughput

0.479

High

252002

RUVB2
RuvB-like helicase 2

1

1

High-throughput

0.479

High

252005

H2A1
Histone H2A-alpha

1

4

High-throughput

0.479

High

252006

H2B1
Histone H2B-alpha

1

2

High-throughput

0.479

High

252007

H4
Histone H4

1

3

High-throughput

0.479

High

252008

RPA1
DNA-directed RNA polymerase I subunit rpa1

1

1

High-throughput

0.479

High

252014

CSK2A
Casein kinase II subunit alpha

1

5

High-throughput

0.479

High

252019

NAT10
RNA cytidine acetyltransferase

1

1

High-throughput

0.479

High

252020

YDM6
Uncharacterized protein C57A7.06

1

3

High-throughput

0.479

High

252021

GAR1
H/ACA ribonucleoprotein complex subunit gar1

1

2

High-throughput

0.479

High

252031

KRI1
Protein kri1

1

3

High-throughput

0.479

High

252034

RFC2
Replication factor C subunit 2

1

2

High-throughput

0.479

High

252038

RHO1
GTP-binding protein rho1

1

2

High-throughput

0.479

High

252039

HAS1
ATP-dependent RNA helicase has1

1

9

High-throughput

0.479

High

252040

FAL1
ATP-dependent RNA helicase fal1

1

1

Small-scale

0.479

High

252042

RSMB
Small nuclear ribonucleoprotein-associated protein B

1

3

High-throughput

0.479

High

252045

PAP
Poly(A) polymerase pla1

1

4

Small-scale

0.479

High

252049

CDK9
Probable cyclin-dependent kinase 9

1

1

High-throughput

0.479

High

252051

RUVB1
RuvB-like helicase 1

1

1

High-throughput

0.479

High

252054

ASE1
Anaphase spindle elongation protein 1

1

1

High-throughput

0.479

High

252057

BRX1
Ribosome biogenesis protein brx1

1

13

High-throughput

0.479

High

252059

CDC48
Cell division cycle protein 48

1

2

High-throughput

0.479

High

252062

YLA3
Uncharacterized HTH La-type RNA-binding protein C1527.03

1

11

High-throughput

0.479

High

252069

NHP2
H/ACA ribonucleoprotein complex subunit nhp2

1

3

High-throughput

0.479

High

252074

NOP58
Nucleolar protein 58

1

2

High-throughput

0.479

High

252078

BFR2
Protein bfr2

1

3

High-throughput

0.479

High

252086

MRT4
Ribosome assembly factor mrt4

1

1

High-throughput

0.479

High

252089

MAK16
Protein mak16

1

2

High-throughput

0.479

High

252091

PUF6
Pumilio homology domain family member 6

1

6

High-throughput

0.479

High

252092

NSA2
Ribosome biogenesis protein nsa2

1

2

High-throughput

0.479

High

252095

SMD3
Small nuclear ribonucleoprotein Sm D3

1

3

High-throughput

0.479

High

252096

RPF2
Ribosome production factor 2 homolog

1

3

High-throughput

0.479

High

252103

MEX67
mRNA export factor mex67

1

4

High-throughput

0.479

High

143250

EBP2
Probable rRNA-processing protein ebp2

1

0

High-throughput

0.458

High

143264

YE07
Uncharacterized protein C17H9.07

1

0

High-throughput

0.458

High

143455

RPAB5
DNA-directed RNA polymerases I, II, and III subunit RPABC5

1

0

High-throughput

0.458

High

144295

RPA49
DNA-directed RNA polymerase I subunit rpa49

1

0

High-throughput

0.458

High

193690

BUD22
Protein bud22

1

0

High-throughput

0.458

High

194839

OGA1
Ribosome-associated protein oga1

1

0

High-throughput

0.458

High

195087

RPA43
DNA-directed RNA polymerase I subunit rpa43

1

0

High-throughput

0.458

High

223522

YHX7
Protein PBDC1 homolog

1

0

High-throughput

0.458

High

251995

LNP
Endoplasmic reticulum junction formation protein lunapark

1

0

High-throughput

0.458

High

252003

MBF1
Multiprotein-bridging factor 1

1

0

High-throughput

0.458

High

252004

RPA12
DNA-directed RNA polymerase I subunit RPA12

1

0

High-throughput

0.458

High

252010

SPI1
GTP-binding nuclear protein spi1

1

0

High-throughput

0.458

High

252011

FBRL
rRNA 2'-O-methyltransferase fibrillarin

1

0

High-throughput

0.458

High

252013

DIS3
Exosome complex exonuclease dis3

1

0

High-throughput

0.458

High

252017

MID1
Anillin-related medial ring protein mid1

1

0

High-throughput

0.458

High

252025

CDB4
Curved DNA-binding protein

1

0

High-throughput

0.458

High

252026

RPAB1
DNA-directed RNA polymerases I, II, and III subunit RPABC1

1

0

High-throughput

0.458

High

252029

RRP4
Exosome complex component rrp4

1

0

High-throughput

0.458

High

252032

TGS1
Trimethylguanosine synthase

1

0

High-throughput

0.458

High

252035

US108
U1 snRNP-associated protein usp108

1

0

High-throughput

0.458

High

252036

EFG1P
rRNA-processing protein efg1

1

0

High-throughput

0.458

High

252041

RRP6
Exosome complex exonuclease rrp6

1

0

High-throughput

0.458

High

252046

YDBI
Uncharacterized protein C22E12.18

1

0

High-throughput

0.458

High

252048

RPAB3
DNA-directed RNA polymerases I, II, and III subunit RPABC3

1

0

High-throughput

0.458

High

252053

SLX9
Ribosome biogenesis protein slx9

1

0

High-throughput

0.458

High

252076

RPA2
Probable DNA-directed RNA polymerase I subunit RPA2

1

0

High-throughput

0.458

High

252081

SPF27
Pre-mRNA-splicing factor cwf7

1

0

High-throughput

0.458

High

252082

MEP33
mRNA export protein 33

1

0

High-throughput

0.458

High

252084

RUXE
Small nuclear ribonucleoprotein E

1

0

High-throughput

0.458

High

252085

RPA34
DNA-directed RNA polymerase I subunit rpa34

1

0

High-throughput

0.458

High

252093

CWF18
Pre-mRNA-splicing factor cwf18

1

0

High-throughput

0.458

High

252102

NOP16
Nucleolar protein 16

1

0

High-throughput

0.458

High

142019

MS116
ATP-dependent RNA helicase mss116, mitochondrial

1

5

High-throughput

0.437

High

144049

CBF5
H/ACA ribonucleoprotein complex subunit cbf5

1

2

High-throughput

0.437

High

145011

YDD3
Brix domain-containing protein C1B9.03c

1

2

High-throughput

0.437

High

223955

YG65
Uncharacterized helicase C15C4.05

1

5

High-throughput

0.437

High

251754

SNU13
13 kDa ribonucleoprotein-associated protein

1

3

High-throughput

0.437

High

251983

RRP5
rRNA biogenesis protein rrp5

1

3

High-throughput

0.437

High

251984

UTP23
rRNA-processing protein utp23

1

1

High-throughput

0.437

High

251998

PHB2
Prohibitin-2

1

1

High-throughput

0.437

High

252001

NOG1
Probable nucleolar GTP-binding protein 1

1

5

High-throughput

0.437

High

252009

KIN1
Protein kinase kin1

1

1

High-throughput

0.437

High

252012

BYR3
Cellular nucleic acid-binding protein homolog

1

4

High-throughput

0.437

High

252024

DHH1
Putative ATP-dependent RNA helicase ste13

1

2

High-throughput

0.437

High

252033

RENT1
ATP-dependent helicase upf1

1

6

High-throughput

0.437

High

252056

YL92
Uncharacterized protein C683.02c

1

4

High-throughput

0.437

High

252063

ARC1
tRNA-aminoacylation cofactor arc1

1

1

High-throughput

0.437

High

252066

YNY5
LisH domain-containing protein C1711.05

1

2

High-throughput

0.437

High

252068

YKY4
Uncharacterized NOC2 family protein C1142.04

1

1

High-throughput

0.437

High

252070

PHB1
Prohibitin-1

1

1

High-throughput

0.437

High

252072

NOP10
H/ACA ribonucleoprotein complex subunit nop10

1

1

High-throughput

0.437

High

252075

YIW2
Uncharacterized helicase C694.02

1

4

High-throughput

0.437

High

252080

YHHB
HMG box-containing protein C28F2.11

1

3

High-throughput

0.437

High

252083

ATH1
Ataxin-2 homolog

1

4

High-throughput

0.437

High

252087

RL1DB
Putative ribosome biogenesis protein C8F11.04

1

5

High-throughput

0.437

High

252098

NOP53
Ribosome biogenesis protein NOP53

1

5

High-throughput

0.437

High

252099

OTU2
Ubiquitin thioesterase otu2

1

4

High-throughput

0.437

High

142931

SLT1
Protein slt1

1

0

High-throughput

0.249

Low

194937

YBPC
Uncharacterized protein C16H5.12c

1

0

High-throughput

0.249

Low

195208

YGWC
Probable transcriptional regulatory protein C8D2.12c

1

0

High-throughput

0.249

Low

223654

CIF1
Calnexin-independence factor 1

1

0

High-throughput

0.249

Low

224101

PPR2
Pentatricopeptide repeat-containing protein 2, mitochondrial

1

0

High-throughput

0.249

Low

224124

MHR1
Large ribosomal subunit protein mL67

1

0

High-throughput

0.249

Low

224174

RTPT
Small ribosomal subunit protein mS26

1

0

High-throughput

0.249

Low

251866

CWF14
Pre-mRNA-splicing factor cwf14

1

0

High-throughput

0.249

Low

251986

YJB6
Uncharacterized protein C553.06

1

0

High-throughput

0.249

Low

251994

YG0C
Uncharacterized protein C1604.12

1

0

High-throughput

0.249

Low

252016

RTN1
Reticulon-like protein 1

1

0

High-throughput

0.249

Low

252023

RPAC2
DNA-directed RNA polymerases I and III subunit RPAC2

1

0

High-throughput

0.249

Low

252030

MRP20
Large ribosomal subunit protein uL23m

1

0

High-throughput

0.249

Low

252037

YAG7
Uncharacterized protein C12G12.07c

1

0

High-throughput

0.249

Low

252043

DBP3
ATP-dependent RNA helicase dbp3

1

0

High-throughput

0.249

Low

252044

UPF3
Nonsense-mediated mRNA decay protein 3

1

0

High-throughput

0.249

Low

252047

2ABA
Protein phosphatase PP2A regulatory subunit B

1

0

High-throughput

0.249

Low

252050

YNH5
UPF0642 protein C32H8.05

1

0

High-throughput

0.249

Low

252052

YKM7
Uncharacterized protein PB24D3.07c

1

0

High-throughput

0.249

Low

252060

YLI2
Uncharacterized protein C458.02c

1

0

High-throughput

0.249

Low

252064

YOH7
Uncharacterized protein C13E7.07

1

0

High-throughput

0.249

Low

252067

YOFI
Uncharacterized protein P4H10.18c

1

0

High-throughput

0.249

Low

252071

YJN4
Uncharacterized protein C24B10.04

1

0

High-throughput

0.249

Low

252073

RPA14
DNA-directed RNA polymerase I subunit rpa14

1

0

High-throughput

0.249

Low

252088

RRP15
Ribosomal RNA-processing protein 15

1

0

High-throughput

0.249

Low

252094

PAL1
Protein pal1

1

0

High-throughput

0.249

Low

252100

MUG72
Meiotically up-regulated gene 72 protein

1

0

High-throughput

0.249

Low


Service provided by Combinatics, Japan

Last updated: 15 Jul 2024