Protein: PRP9
Pre-mRNA-splicing factor PRP9

Gene: PRP9
Organism: Saccharomyces cerevisiae S288C
Interactions: 106
UniProt ID: P19736

Gene Ontology (top 5):
GO:0000395 - mRNA 5'-splice site recognition
GO:0000398 - mRNA splicing, via spliceosome
GO:0003723 - RNA binding
GO:0005634 - nucleus
GO:0005681 - spliceosomal complex

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

586470

PRP21
Pre-mRNA-splicing factor PRP21

13

4

Small-scale

0.981

High

586513

SMD1
Small nuclear ribonucleoprotein Sm D1

4

1

High-throughput

0.892

High

586514

CUS1
Cold sensitive U2 snRNA suppressor 1

4

1

High-throughput

0.892

High

586492

RSMB
Small nuclear ribonucleoprotein-associated protein B

4

2

High-throughput

0.886

High

586535

NCBP2
Nuclear cap-binding protein subunit 2

4

2

Small-scale

0.873

High

586525

RSE1
Pre-mRNA-splicing factor RSE1

3

1

High-throughput

0.839

High

586495

RUXG
Small nuclear ribonucleoprotein G

3

4

High-throughput

0.830

High

586508

RUXF
Small nuclear ribonucleoprotein F

3

1

High-throughput

0.830

High

586498

SMD3
Small nuclear ribonucleoprotein Sm D3

2

4

High-throughput

0.776

High

586541

RUXE
Small nuclear ribonucleoprotein E

2

1

High-throughput

0.759

High

586548

HSH49
Protein HSH49

2

2

High-throughput

0.754

High

586500

LSM8
U6 snRNA-associated Sm-like protein LSm8

2

6

High-throughput

0.737

High

586531

PRP11
Pre-mRNA-splicing factor PRP11

6

2

Small-scale

0.736

High

586536

RU2A
U2 small nuclear ribonucleoprotein A'

6

2

Small-scale

0.726

High

586471

RU1A
U1 small nuclear ribonucleoprotein A

2

0

High-throughput

0.716

High

586493

LSM4
U6 snRNA-associated Sm-like protein LSm4

1

2

High-throughput

0.691

High

586469

PRP19
Pre-mRNA-processing factor 19

4

3

Small-scale

0.691

High

586477

PRP8
Pre-mRNA-splicing factor 8

3

1

High-throughput

0.662

High

586473

BRR2
Pre-mRNA-splicing helicase BRR2

3

1

Small-scale

0.656

High

586528

SMD2
Small nuclear ribonucleoprotein Sm D2

1

1

High-throughput

0.618

High

586537

CWC2
Pre-mRNA-splicing factor CWC2

1

3

High-throughput

0.618

High

586519

CEF1
Pre-mRNA-splicing factor CEF1

2

3

High-throughput

0.611

High

586487

SP381
Pre-mRNA-splicing factor SPP381

2

0

High-throughput

0.595

High

586510

NAM8
Protein NAM8

1

0

High-throughput

0.586

High

586456

PRP2
Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein PRP2

2

1

High-throughput

0.584

High

586517

CWC21
Pre-mRNA-splicing factor CWC21

2

0

High-throughput

0.576

High

586509

LSM3
U6 snRNA-associated Sm-like protein LSm3

1

5

High-throughput

0.575

High

586478

NCBP1
Nuclear cap-binding protein complex subunit 1

2

0

High-throughput

0.559

High

586494

SSB2
Ribosome-associated molecular chaperone SSB2

2

2

High-throughput

0.552

High

586546

NSI1
RNA polymerase I termination factor

1

0

High-throughput

0.518

High

586503

TAF4
Transcription initiation factor TFIID subunit 4

1

1

High-throughput

0.508

High

586467

RPN12
26S proteasome regulatory subunit RPN12

1

0

High-throughput

0.493

High

586461

MRC1
Mediator of replication checkpoint protein 1

1

0

High-throughput

0.486

High

586475

SLX5
E3 ubiquitin-protein ligase complex SLX5-SLX8 subunit SLX5

1

0

High-throughput

0.486

High

586518

VPS72
Vacuolar protein sorting-associated protein 72

1

0

High-throughput

0.486

High

586524

ARO80
Transcriptional activator ARO80

1

0

High-throughput

0.486

High

586533

ULS1
ATP-dependent helicase ULS1

1

0

High-throughput

0.486

High

586538

NOP53
Ribosome biogenesis protein NOP53

1

0

High-throughput

0.486

High

586545

AHC1
Protein AHC1

1

0

High-throughput

0.486

High

586481

CENPA
Histone H3-like centromeric protein CSE4

1

1

High-throughput

0.481

High

586457

PRP5
Pre-mRNA-processing ATP-dependent RNA helicase PRP5

1

1

High-throughput

0.479

High

586459

BUD31
Pre-mRNA-splicing factor BUD31

1

1

High-throughput

0.479

High

586463

PRP45
Pre-mRNA-processing protein 45

1

1

High-throughput

0.479

High

586482

SN114
Pre-mRNA-splicing factor SNU114

1

1

High-throughput

0.479

High

586484

GBLP
Small ribosomal subunit protein RACK1

1

2

High-throughput

0.479

High

586496

MSL1
U2 small nuclear ribonucleoprotein B''

1

4

High-throughput

0.479

High

586497

PRP17
Pre-mRNA-processing factor 17

1

3

High-throughput

0.479

High

586502

SF3B1
U2 snRNP component HSH155

1

2

High-throughput

0.479

High

586523

SYF1
Pre-mRNA-splicing factor SYF1

1

3

High-throughput

0.479

High

586530

RDS3
Pre-mRNA-splicing factor RDS3

1

1

High-throughput

0.479

High

586539

BBP
Branchpoint-bridging protein

1

1

High-throughput

0.479

High

586540

CLF1
Pre-mRNA-splicing factor CLF1

1

4

High-throughput

0.479

High

586543

PRP46
Pre-mRNA-splicing factor PRP46

1

2

High-throughput

0.479

High

561137

MER1
Meiotic recombination 1 protein

1

0

Small-scale

0.460

High

565255

SPO12
Sporulation-specific protein 12

1

0

High-throughput

0.460

High

586479

CENPC
Inner kinetochore subunit MIF2

1

0

High-throughput

0.460

High

586491

SPC25
Kinetochore protein SPC25

1

0

High-throughput

0.460

High

586504

SKP1
Suppressor of kinetochore protein 1

1

0

High-throughput

0.460

High

586515

CENPP
Inner kinetochore subunit CTF19

1

0

High-throughput

0.460

High

586542

SCM3
Protein SCM3

1

0

High-throughput

0.460

High

382942

RL25
Large ribosomal subunit protein uL23

1

0

High-throughput

0.458

High

405420

RL26A
Large ribosomal subunit protein uL24A

1

0

High-throughput

0.458

High

406769

RS3
Small ribosomal subunit protein uS3

1

0

High-throughput

0.458

High

425754

RS19A
Small ribosomal subunit protein eS19A

1

0

High-throughput

0.458

High

469783

YSF3
RDS3 complex subunit 10

1

0

High-throughput

0.458

High

586464

YJU2
Splicing factor YJU2

1

0

High-throughput

0.458

High

586465

TF2B
Transcription initiation factor IIB

1

0

High-throughput

0.458

High

586466

BMH1
Protein BMH1

1

0

High-throughput

0.458

High

586468

NAB2
Nuclear polyadenylated RNA-binding protein NAB2

1

0

High-throughput

0.458

High

586480

RS27A
Small ribosomal subunit protein eS27A

1

0

High-throughput

0.458

High

586483

YK21
Uncharacterized protein YKR041W

1

0

High-throughput

0.458

High

586486

SLT11
Pre-mRNA-splicing factor SLT11

1

0

High-throughput

0.458

High

586488

NTC20
Pre-mRNA-splicing factor NTC20

1

0

High-throughput

0.458

High

586499

CWC26
Pre-mRNA-splicing factor CWC26

1

0

High-throughput

0.458

High

586505

SYF2
Pre-mRNA-splicing factor SYF2

1

0

High-throughput

0.458

High

586507

CWC22
Pre-mRNA-splicing factor CWC22

1

0

High-throughput

0.458

High

586512

RS15
Small ribosomal subunit protein uS19

1

0

High-throughput

0.458

High

586516

SLU7
Pre-mRNA-splicing factor SLU7

1

0

High-throughput

0.458

High

586520

CWC15
Pre-mRNA-splicing factor CWC15

1

0

High-throughput

0.458

High

586521

SNU56
56 kDa U1 small nuclear ribonucleoprotein component

1

0

High-throughput

0.458

High

586522

SCC2
Sister chromatid cohesion protein 2

1

0

High-throughput

0.458

High

586527

SN309
Pre-mRNA-splicing factor SNT309

1

0

High-throughput

0.458

High

586529

URN1
Pre-mRNA-splicing factor URN1

1

0

High-throughput

0.458

High

586534

RS10A
Small ribosomal subunit protein eS10A

1

0

High-throughput

0.458

High

586544

SNU66
66 kDa U4/U6.U5 small nuclear ribonucleoprotein component

1

0

Small-scale

0.458

High

586526

CIAO1
Cytosolic iron-sulfur protein assembly protein 1

1

2

High-throughput

0.457

High

586485

CDC27
Anaphase-promoting complex subunit CDC27

1

1

High-throughput

0.439

High

500536

MTF2
Mitochondrial transcription factor 2

1

0

High-throughput

0.438

High

586547

PSF1
DNA replication complex GINS protein PSF1

1

0

High-throughput

0.438

High

586462

RS7A
Small ribosomal subunit protein eS7A

1

1

High-throughput

0.437

High

586532

ADY3
Accumulates dyads protein 3

1

1

High-throughput

0.417

High

294091

SEM1
26S proteasome complex subunit SEM1

1

0

High-throughput

0.269

Low

586472

PT127
Putative mitochondrial translation system component PET127

1

0

High-throughput

0.265

Low

586511

MDM1
Structural protein MDM1

1

0

High-throughput

0.265

Low

586506

CENPQ
Inner kinetochore subunit OKP1

1

0

High-throughput

0.251

Low

141144

RS9A
Small ribosomal subunit protein uS4A

1

0

High-throughput

0.249

Low

407714

RS13
Small ribosomal subunit protein uS15

1

0

High-throughput

0.249

Low

482073

RS18A
Small ribosomal subunit protein uS13A

1

0

High-throughput

0.249

Low

586458

ISY1
Pre-mRNA-splicing factor ISY1

1

0

High-throughput

0.249

Low

586460

RS2
Small ribosomal subunit protein uS5

1

0

High-throughput

0.249

Low

586476

RSSA1
Small ribosomal subunit protein uS2A

1

0

High-throughput

0.249

Low

586489

RS20
Small ribosomal subunit protein uS10

1

0

High-throughput

0.249

Low

586490

LAA1
AP-1 accessory protein LAA1

1

0

High-throughput

0.249

Low

586501

RS12
Small ribosomal subunit protein eS12

1

0

High-throughput

0.249

Low

586474

ELM1
Serine/threonine-protein kinase ELM1

1

0

High-throughput

0.238

Low

543168

HSC82
ATP-dependent molecular chaperone HSC82

1

0

High-throughput

0.232

Low


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Last updated: 15 Jul 2024