Protein: IPI3
Pre-rRNA-processing protein IPI3 (Involved in processing IST2 protein 3)

Gene: IPI3
Organism: Saccharomyces cerevisiae S288C
Interactions: 138
UniProt ID: P53877

Gene Ontology (top 5):
GO:0000027 - ribosomal large subunit assembly
GO:0003682 - chromatin binding
GO:0005634 - nucleus
GO:0005654 - nucleoplasm
GO:0005656 - nuclear pre-replicative complex

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

630882

NLE1
Ribosome assembly protein 4

3

18

Small-scale

0.855

High

756850

RIX1
Pre-rRNA-processing protein RIX1

14

1

Small-scale

0.761

High

755248

IPI1
Pre-rRNA-processing protein IPI1

5

4

High-throughput

0.716

High

861393

SDA1
Protein SDA1

5

2

Small-scale

0.709

High

766676

NUG1
Nuclear GTP-binding protein NUG1

5

10

Small-scale

0.702

High

865683

BUD20
Bud site selection protein 20

4

1

Small-scale

0.699

High

865659

NOP15
Ribosome biogenesis protein 15

4

8

High-throughput

0.691

High

864656

NOG2
Nucleolar GTP-binding protein 2

4

10

Small-scale

0.686

High

865672

ARX1
Probable metalloprotease ARX1

4

2

Small-scale

0.686

High

865693

IF6
Eukaryotic translation initiation factor 6

3

2

High-throughput

0.667

High

865687

MDN1
Midasin

3

12

Small-scale

0.646

High

810581

ALB1
Ribosome biogenesis protein ALB1

3

1

Small-scale

0.640

High

860849

PESC
Pescadillo homolog

3

2

High-throughput

0.640

High

865670

NOG1
Nucleolar GTP-binding protein 1

3

6

Small-scale

0.640

High

742925

GBLP
Small ribosomal subunit protein RACK1

1

18

High-throughput

0.618

High

865677

ATG17
Autophagy-related protein 17

2

0

High-throughput

0.606

High

754159

CIC1
Proteasome-interacting protein CIC1

3

6

High-throughput

0.599

High

865658

IPI3
Pre-rRNA-processing protein IPI3

1

18

High-throughput

0.590

High

638826

SPB4
ATP-dependent rRNA helicase SPB4

2

16

High-throughput

0.584

High

703088

MRT4
Ribosome assembly factor MRT4

2

5

Small-scale

0.584

High

733888

RPF2
Ribosome biogenesis protein RPF2

2

2

Small-scale

0.584

High

865688

NOP53
Ribosome biogenesis protein NOP53

2

1

High-throughput

0.584

High

358193

RS17A
Small ribosomal subunit protein eS17A

1

4

High-throughput

0.553

High

667248

RL8B
Large ribosomal subunit protein eL8B

1

8

High-throughput

0.553

High

820097

RS12
Small ribosomal subunit protein eS12

1

5

High-throughput

0.553

High

447804

CDC6
Cell division control protein 6

1

1

Small-scale

0.552

High

859093

ATG1
Serine/threonine-protein kinase ATG1

2

9

High-throughput

0.542

High

758918

NAB3
Nuclear polyadenylated RNA-binding protein 3

1

3

High-throughput

0.541

High

356633

H4
Histone H4

1

11

High-throughput

0.536

High

776478

RLP7
Ribosome biogenesis protein RLP7

2

9

High-throughput

0.533

High

811832

CDT1
Cell division cycle protein CDT1

1

0

Small-scale

0.529

High

731130

LHS1
Heat shock protein 70 homolog LHS1

2

20

High-throughput

0.526

High

797377

LOC1
60S ribosomal subunit assembly/export protein LOC1

1

0

High-throughput

0.513

High

412829

KAPA
cAMP-dependent protein kinase type 1

1

4

High-throughput

0.501

High

565725

PHO85
Cyclin-dependent protein kinase PHO85

1

6

High-throughput

0.501

High

752169

KSP1
Serine/threonine-protein kinase KSP1

1

5

High-throughput

0.501

High

454422

TBA1
Tubulin alpha-1 chain

1

10

High-throughput

0.500

High

633454

MAS5
Mitochondrial protein import protein MAS5

1

13

High-throughput

0.500

High

865691

RUVB2
RuvB-like protein 2

1

7

High-throughput

0.500

High

675542

MCM4
DNA replication licensing factor MCM4

1

3

Small-scale

0.481

High

710800

CASP
Protein CASP

1

11

High-throughput

0.481

High

757076

SKN7
Transcription factor SKN7

1

4

High-throughput

0.481

High

865673

YAP6
AP-1-like transcription factor YAP6

1

1

High-throughput

0.481

High

865692

RLF2
Chromatin assembly factor 1 subunit p90

1

9

High-throughput

0.481

High

141458

RS9A
Small ribosomal subunit protein uS4A

1

8

High-throughput

0.479

High

383279

RL25
Large ribosomal subunit protein uL23

1

4

High-throughput

0.479

High

407224

RS3
Small ribosomal subunit protein uS3

1

7

High-throughput

0.479

High

408427

RS31
Ubiquitin-ribosomal protein eS31 fusion protein [Cleaved into: Ubiquitin; Small ribosomal subunit protein eS31

1

8

High-throughput

0.479

High

413641

RS14A
Small ribosomal subunit protein uS11A

1

6

High-throughput

0.479

High

480239

RS6A
Small ribosomal subunit protein eS6A

1

6

High-throughput

0.479

High

535074

RL3
Large ribosomal subunit protein uL3

1

5

High-throughput

0.479

High

558183

RPB3
DNA-directed RNA polymerase II subunit RPB3

1

3

High-throughput

0.479

High

622181

MCM3
DNA replication licensing factor MCM3

1

4

Small-scale

0.479

High

628327

SIS1
Protein SIS1

1

11

High-throughput

0.479

High

632013

RS2
Small ribosomal subunit protein uS5

1

3

High-throughput

0.479

High

645576

RS7A
Small ribosomal subunit protein eS7A

1

4

High-throughput

0.479

High

662961

TF2B
Transcription initiation factor IIB

1

5

High-throughput

0.479

High

667610

MCM2
DNA replication licensing factor MCM2

1

3

Small-scale

0.479

High

698177

AFG2
ATPase family gene 2 protein

1

6

High-throughput

0.479

High

746255

YBC8
UPF0642 protein YBL028C

1

1

High-throughput

0.479

High

768029

NSA2
Ribosome biogenesis protein NSA2

1

3

High-throughput

0.479

High

859978

CGR1
rRNA-processing protein CGR1

1

1

High-throughput

0.479

High

865661

ORC1
Origin recognition complex subunit 1

1

3

Small-scale

0.479

High

865663

H3
Histone H3

1

14

High-throughput

0.479

High

865669

RL6A
Large ribosomal subunit protein eL6A

1

2

High-throughput

0.479

High

865676

MMS22
E3 ubiquitin-protein ligase substrate receptor MMS22

1

3

High-throughput

0.479

High

865678

NOC4
Nucleolar complex protein 4

1

5

High-throughput

0.479

High

865681

NOC3
Nucleolar complex-associated protein 3

1

3

Small-scale

0.479

High

865686

RRS1
Regulator of ribosome biosynthesis

1

2

High-throughput

0.479

High

865690

SCC1
Sister chromatid cohesion protein 1

1

1

High-throughput

0.479

High

599923

RE107
Recombination protein 107

1

0

High-throughput

0.460

High

698728

ORC2
Origin recognition complex subunit 2

1

0

Small-scale

0.460

High

693141

CDC5
Cell cycle serine/threonine-protein kinase CDC5/MSD2

1

0

High-throughput

0.458

High

865662

ORC3
Origin recognition complex subunit 3

1

0

Small-scale

0.458

High

865674

SCC2
Sister chromatid cohesion protein 2

1

0

High-throughput

0.458

High

865684

TMA16
Translation machinery-associated protein 16

1

0

High-throughput

0.458

High

360983

TBB
Tubulin beta chain

1

9

High-throughput

0.457

High

423887

ATPA
ATP synthase subunit alpha, mitochondrial

1

6

High-throughput

0.457

High

453020

DLDH
Dihydrolipoyl dehydrogenase, mitochondrial

1

2

High-throughput

0.457

High

498565

METK1
S-adenosylmethionine synthase 1

1

3

High-throughput

0.457

High

520859

ODP2
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial

1

6

High-throughput

0.457

High

521026

G6PI
Glucose-6-phosphate isomerase

1

1

High-throughput

0.457

High

715833

MDJ1
DnaJ homolog 1, mitochondrial

1

12

High-throughput

0.457

High

492044

HSP71
Heat shock protein SSA1

1

17

High-throughput

0.445

High

512254

SSB1
Ribosome-associated molecular chaperone SSB1

1

19

High-throughput

0.445

High

515201

SCH9
Serine/threonine-protein kinase SCH9

1

3

High-throughput

0.445

High

754607

SSZ1
Ribosome-associated complex subunit SSZ1

1

13

High-throughput

0.445

High

769102

SSB2
Ribosome-associated molecular chaperone SSB2

1

19

High-throughput

0.445

High

865679

IRC20
Uncharacterized ATP-dependent helicase IRC20

1

11

High-throughput

0.445

High

690240

CDC3
Cell division control protein 3

1

3

High-throughput

0.439

High

764869

SNF7
Vacuolar-sorting protein SNF7

1

7

High-throughput

0.439

High

767530

TSC11
Target of rapamycin complex 2 subunit TSC11

1

6

High-throughput

0.439

High

865526

CNM67
Chaotic nuclear migration protein 67

1

8

High-throughput

0.439

High

865660

NST1
Stress response protein NST1

1

11

High-throughput

0.439

High

865664

DID2
Vacuolar protein-sorting-associated protein 46

1

2

High-throughput

0.439

High

865671

BUL2
Ubiquitin ligase-binding protein BUL2

1

2

High-throughput

0.439

High

775940

MET28
Transcriptional activator of sulfur metabolism MET28

1

0

High-throughput

0.438

High

829095

CTR1
Copper transport protein CTR1

1

0

High-throughput

0.438

High

865689

YP022
Zinc finger protein YPR022C

1

0

High-throughput

0.438

High

404660

RL7A
Large ribosomal subunit protein uL30A

1

9

High-throughput

0.437

High

404890

RL9A
Large ribosomal subunit protein uL6A

1

2

High-throughput

0.437

High

405243

RL17A
Large ribosomal subunit protein uL22A

1

3

High-throughput

0.437

High

405753

RL26A
Large ribosomal subunit protein uL24A

1

6

High-throughput

0.437

High

408046

RS13
Small ribosomal subunit protein uS15

1

5

High-throughput

0.437

High

426082

RS19A
Small ribosomal subunit protein eS19A

1

4

High-throughput

0.437

High

471184

RS22A
Small ribosomal subunit protein uS8A

1

4

High-throughput

0.437

High

472325

RL31A
Large ribosomal subunit protein eL31A

1

3

High-throughput

0.437

High

478949

RL20B
Large ribosomal subunit protein eL20B

1

2

High-throughput

0.437

High

479153

RL43B
Large ribosomal subunit protein eL43B

1

1

High-throughput

0.437

High

480806

RS8A
Small ribosomal subunit protein eS8A

1

5

High-throughput

0.437

High

482389

RS18A
Small ribosomal subunit protein uS13A

1

4

High-throughput

0.437

High

544192

HSC82
ATP-dependent molecular chaperone HSC82

1

12

High-throughput

0.437

High

645093

RL16A
Large ribosomal subunit protein uL13A

1

5

High-throughput

0.437

High

700552

RSSA1
Small ribosomal subunit protein uS2A

1

3

High-throughput

0.437

High

701019

SMY2
Protein SMY2

1

3

High-throughput

0.437

High

706413

RS3A1
Small ribosomal subunit protein eS1A

1

4

High-throughput

0.437

High

730049

RS27A
Small ribosomal subunit protein eS27A

1

1

High-throughput

0.437

High

752589

RS20
Small ribosomal subunit protein uS10

1

2

High-throughput

0.437

High

758685

TEM1
Protein TEM1

1

4

High-throughput

0.437

High

762440

LAA1
AP-1 accessory protein LAA1

1

4

High-throughput

0.437

High

770428

RL13B
Large ribosomal subunit protein eL13B

1

2

High-throughput

0.437

High

865665

RL34A
Large ribosomal subunit protein eL34A

1

2

High-throughput

0.437

High

865667

RS15
Small ribosomal subunit protein uS19

1

3

High-throughput

0.437

High

865680

VAM6
Vacuolar morphogenesis protein 6

1

2

High-throughput

0.437

High

865682

RLP24
Ribosome biogenesis protein RLP24

1

2

High-throughput

0.437

High

865685

RS10A
Small ribosomal subunit protein eS10A

1

6

High-throughput

0.437

High

581309

ODO2
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial

1

6

High-throughput

0.417

High

699208

PEP12
Syntaxin PEP12

1

2

High-throughput

0.417

High

580907

IRA2
Inhibitory regulator protein IRA2

1

4

High-throughput

0.407

High

705499

HSP78
Heat shock protein 78, mitochondrial

1

4

High-throughput

0.407

High

772455

ALG5
Dolichyl-phosphate beta-glucosyltransferase

1

0

High-throughput

0.282

High

859666

SP105
Spindle pole body component SPC105

1

0

High-throughput

0.251

Low

865675

SHE9
Sensitive to high expression protein 9, mitochondrial

1

0

High-throughput

0.251

Low

743294

RL32
Large ribosomal subunit protein eL32

1

0

High-throughput

0.249

Low

865666

SPR6
Sporulation-specific protein

1

0

High-throughput

0.238

Low

854928

NU188
Nucleoporin NUP188

1

0

High-throughput

0.232

Low

865668

NAA35
N-alpha-acetyltransferase 35, NatC auxiliary subunit

1

0

High-throughput

0.232

Low


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Last updated: 15 Jul 2024