Protein: BBP
Branchpoint-bridging protein (Mud synthetic-lethal 5 protein) (Splicing factor 1) (Zinc finger protein BBP)

Gene: BBP, MSL5
Organism: Saccharomyces cerevisiae S288C
Interactions: 89
UniProt ID: Q12186

Gene Ontology (top 5):
GO:0000243 - commitment complex
GO:0000245 - spliceosomal complex assembly
GO:0000398 - mRNA splicing, via spliceosome
GO:0003729 - mRNA binding
GO:0005634 - nucleus

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

960480

NAM8
Protein NAM8

2

6

Small-scale

0.754

High

965515

NOP3
Serine/arginine

2

15

Small-scale

0.754

High

1015263

BBP
Branchpoint-bridging protein

2

15

Small-scale

0.737

High

732406

MUD2
Splicing factor MUD2

14

0

Small-scale

0.728

High

696677

RU1A
U1 small nuclear ribonucleoprotein A

2

0

Small-scale

0.716

High

701136

SMY2
Protein SMY2

4

1

Small-scale

0.683

High

703288

PRP40
Pre-mRNA-processing protein PRP40

3

5

Small-scale

0.661

High

973033

SYH1
SMY2 homolog 2

3

7

Small-scale

0.645

High

376973

PABP
Polyadenylate-binding protein, cytoplasmic and nuclear

1

5

Small-scale

0.618

High

694305

PUB1
Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1

1

12

High-throughput

0.618

High

863707

PAP2
Poly(A) RNA polymerase protein 2

1

1

Small-scale

0.618

High

865327

GIS2
Zinc finger protein GIS2

1

1

High-throughput

0.618

High

962603

RU17
U1 small nuclear ribonucleoprotein 70 kDa homolog

1

20

Small-scale

0.618

High

1015193

YRA1
RNA annealing protein YRA1

1

6

Small-scale

0.618

High

763256

PRP39
Pre-mRNA-processing factor 39

2

6

Small-scale

0.600

High

561147

MER1
Meiotic recombination 1 protein

1

0

Small-scale

0.589

High

622350

PRP22
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22

1

4

High-throughput

0.587

High

977618

SNU56
56 kDa U1 small nuclear ribonucleoprotein component

2

0

Small-scale

0.559

High

676466

XPO1
Exportin-1

1

4

High-throughput

0.536

High

977120

SKY1
Serine/threonine-protein kinase SKY1

1

7

High-throughput

0.536

High

715250

TOR1
Serine/threonine-protein kinase TOR1

1

1

High-throughput

0.508

High

1015264

CMR1
DNA damage-binding protein CMR1

1

4

High-throughput

0.508

High

452133

SWI1
SWI/SNF chromatin-remodeling complex subunit SWI1

1

0

High-throughput

0.486

High

774203

ASG1
Activator of stress genes 1

1

0

High-throughput

0.486

High

405884

RL26A
Large ribosomal subunit protein uL24A

1

1

High-throughput

0.479

High

416108

DED1
ATP-dependent RNA helicase DED1

1

8

Small-scale

0.479

High

586539

PRP9
Pre-mRNA-splicing factor PRP9

1

1

High-throughput

0.479

High

598587

PRP5
Pre-mRNA-processing ATP-dependent RNA helicase PRP5

1

10

High-throughput

0.479

High

635943

PAT1
Deadenylation-dependent mRNA-decapping factor PAT1

1

1

Small-scale

0.479

High

692439

PRP21
Pre-mRNA-splicing factor PRP21

1

2

High-throughput

0.479

High

710238

NCBP1
Nuclear cap-binding protein complex subunit 1

1

1

Small-scale

0.479

High

743057

GBLP
Small ribosomal subunit protein RACK1

1

5

High-throughput

0.479

High

765103

IF4F1
Eukaryotic initiation factor 4F subunit p150

1

3

Small-scale

0.479

High

765170

IF4F2
Eukaryotic initiation factor 4F subunit p130

1

7

Small-scale

0.479

High

766975

RSMB
Small nuclear ribonucleoprotein-associated protein B

1

3

Small-scale

0.479

High

810382

SET2
Histone-lysine N-methyltransferase, H3 lysine-36 specific

1

4

Small-scale

0.479

High

820233

RS12
Small ribosomal subunit protein eS12

1

1

High-throughput

0.479

High

836949

SF3B1
U2 snRNP component HSH155

1

4

High-throughput

0.479

High

859460

PRP43
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43

1

3

Small-scale

0.479

High

861305

PBP1
PAB1-binding protein 1

1

2

Small-scale

0.479

High

864636

BRE5
UBP3-associated protein BRE5

1

4

Small-scale

0.479

High

965071

UBP3
Ubiquitin carboxyl-terminal hydrolase 3

1

2

Small-scale

0.479

High

977595

PRP42
U1 small nuclear ribonucleoprotein component PRP42

1

5

Small-scale

0.479

High

991157

PRP11
Pre-mRNA-splicing factor PRP11

1

1

High-throughput

0.479

High

996349

RS10A
Small ribosomal subunit protein eS10A

1

1

High-throughput

0.479

High

997044

RU2A
U2 small nuclear ribonucleoprotein A'

1

3

Small-scale

0.479

High

141580

RS9A
Small ribosomal subunit protein uS4A

1

0

High-throughput

0.458

High

358309

RS17A
Small ribosomal subunit protein eS17A

1

0

High-throughput

0.458

High

383406

RL25
Large ribosomal subunit protein uL23

1

0

High-throughput

0.458

High

408183

RS13
Small ribosomal subunit protein uS15

1

0

High-throughput

0.458

High

413766

RS14A
Small ribosomal subunit protein uS11A

1

0

High-throughput

0.458

High

424936

IF4E
Eukaryotic translation initiation factor 4E

1

0

Small-scale

0.458

High

426205

RS19A
Small ribosomal subunit protein eS19A

1

0

High-throughput

0.458

High

471314

RS22A
Small ribosomal subunit protein uS8A

1

0

High-throughput

0.458

High

472451

RL31A
Large ribosomal subunit protein eL31A

1

0

High-throughput

0.458

High

480376

RS6A
Small ribosomal subunit protein eS6A

1

0

High-throughput

0.458

High

480945

RS8A
Small ribosomal subunit protein eS8A

1

0

High-throughput

0.458

High

482512

RS18A
Small ribosomal subunit protein uS13A

1

0

High-throughput

0.458

High

558321

RPB3
DNA-directed RNA polymerase II subunit RPB3

1

0

High-throughput

0.458

High

605180

XRN1
5'-3' exoribonuclease 1

1

0

Small-scale

0.458

High

632146

RS2
Small ribosomal subunit protein uS5

1

0

High-throughput

0.458

High

645711

RS7A
Small ribosomal subunit protein eS7A

1

0

High-throughput

0.458

High

663646

TF2B
Transcription initiation factor IIB

1

0

High-throughput

0.458

High

700680

RSSA1
Small ribosomal subunit protein uS2A

1

0

High-throughput

0.458

High

706554

RS3A1
Small ribosomal subunit protein eS1A

1

0

High-throughput

0.458

High

730173

RS27A
Small ribosomal subunit protein eS27A

1

0

High-throughput

0.458

High

752728

RS20
Small ribosomal subunit protein uS10

1

0

High-throughput

0.458

High

755879

LSM12
Protein LSM12

1

0

Small-scale

0.458

High

795432

SMD3
Small nuclear ribonucleoprotein Sm D3

1

0

Small-scale

0.458

High

860162

SNU71
U1 small nuclear ribonucleoprotein component SNU71

1

0

Small-scale

0.458

High

967824

RS15
Small ribosomal subunit protein uS19

1

0

High-throughput

0.458

High

970251

SMD1
Small nuclear ribonucleoprotein Sm D1

1

0

Small-scale

0.458

High

985138

RU1C
U1 small nuclear ribonucleoprotein C

1

0

Small-scale

0.458

High

986608

SMD2
Small nuclear ribonucleoprotein Sm D2

1

0

Small-scale

0.458

High

991487

LUC7
Protein LUC7

1

0

Small-scale

0.458

High

1015169

SCC1
Sister chromatid cohesion protein 1

1

0

High-throughput

0.458

High

1015266

NOP14
Nucleolar complex protein 14

1

0

Small-scale

0.458

High

809556

CWC26
Pre-mRNA-splicing factor CWC26

1

1

Small-scale

0.457

High

492808

HSP71
Heat shock protein SSA1

1

6

High-throughput

0.445

High

495279

HSP72
Heat shock protein SSA2

1

6

High-throughput

0.445

High

513163

SSB1
Ribosome-associated molecular chaperone SSB1

1

6

High-throughput

0.445

High

769777

SSB2
Ribosome-associated molecular chaperone SSB2

1

6

High-throughput

0.445

High

979079

DHR1
Probable ATP-dependent RNA helicase DHR1

1

3

Small-scale

0.437

High

647458

AP2B
AP-2 complex subunit beta

1

0

High-throughput

0.265

Low

981009

KAR5
Nuclear fusion protein KAR5

1

0

High-throughput

0.265

Low

1015265

ENT1
Epsin-1

1

0

High-throughput

0.265

Low

976433

EBS1
Nonsense-mediated mRNA decay factor EBS1

1

0

Small-scale

0.249

Low

991351

VAM6
Vacuolar morphogenesis protein 6

1

0

High-throughput

0.249

Low


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Last updated: 15 Jul 2024