HitPredict - High confidence protein-protein interactions

Download interactions: TXT MITAB-2.5

Interaction	Interactor	Experiments	Homologs	Category	Interaction Score	Confidence
1015627	NOP58 Nucleolar protein 58	14	9	Small-scale	0.982	High
549534	FBRL rRNA 2'-O-methyltransferase fibrillarin	11	8	Small-scale	0.978	High
766372	SNU13 13 kDa ribonucleoprotein-associated protein	8	9	Small-scale	0.969	High
704455	CBF5 H/ACA ribonucleoprotein complex subunit CBF5	6	2	High-throughput	0.735	High
748751	ENP1 Essential nuclear protein 1	6	1	Small-scale	0.724	High
767445	UTP7 U3 small nucleolar RNA-associated protein 7	5	7	High-throughput	0.720	High
634834	KRR1 KRR1 small subunit processome component	5	2	High-throughput	0.716	High
792637	UTP10 U3 small nucleolar RNA-associated protein 10	5	2	High-throughput	0.714	High
979089	DHR1 Probable ATP-dependent RNA helicase DHR1	5	8	Small-scale	0.702	High
635672	PWP2 Periodic tryptophan protein 2	4	11	High-throughput	0.697	High
995877	UTP16 U3 small nucleolar RNA-associated protein 16	4	1	High-throughput	0.697	High
593730	DBP4 ATP-dependent RNA helicase HCA4	4	15	High-throughput	0.694	High
987701	NOC4 Nucleolar complex protein 4	4	8	Small-scale	0.676	High
756813	UTP9 U3 small nucleolar RNA-associated protein 9	3	1	High-throughput	0.667	High
987622	RRP9 Ribosomal RNA-processing protein 9	3	12	High-throughput	0.667	High
742093	NOP4 Nucleolar protein 4	3	3	High-throughput	0.662	High
593575	DBP3 ATP-dependent RNA helicase DBP3	3	2	High-throughput	0.657	High
811376	NOP9 Nucleolar protein 9	3	1	Small-scale	0.650	High
492916	HSP71 Heat shock protein SSA1	3	6	High-throughput	0.633	High
982925	RRP5 rRNA biogenesis protein RRP5	3	7	Small-scale	0.633	High
648456	NSR1 Nuclear localization sequence-binding protein	2	2	High-throughput	0.628	High
778896	NOP2 25S rRNA	2	2	High-throughput	0.621	High
1015624	NOP56 Nucleolar protein 56	1	9	Small-scale	0.621	High
691445	NHP2 H/ACA ribonucleoprotein complex subunit NHP2	1	9	High-throughput	0.618	High
743069	GBLP Small ribosomal subunit protein RACK1	2	9	High-throughput	0.611	High
772702	UTP18 U3 small nucleolar RNA-associated protein 18	2	1	High-throughput	0.611	High
859468	PRP43 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43	2	4	High-throughput	0.611	High
863708	PAP2 Poly(A) RNA polymerase protein 2	2	4	Small-scale	0.611	High
985918	MRD1 Multiple RNA-binding domain-containing protein 1	2	5	Small-scale	0.611	High
693896	SRP40 Suppressor protein SRP40	2	4	High-throughput	0.601	High
733987	RPF2 Ribosome biogenesis protein RPF2	2	1	High-throughput	0.601	High
864752	ESF2 Pre-rRNA-processing protein ESF2	2	1	High-throughput	0.601	High
986293	MMS22 E3 ubiquitin-protein ligase substrate receptor MMS22	2	1	High-throughput	0.601	High
986418	YL455 PWWP domain-containing protein YLR455W	2	3	High-throughput	0.601	High
994601	NOP8 60S ribosome subunit biogenesis protein NOP8	2	1	High-throughput	0.601	High
810408	JJJ2 J protein JJJ2	2	1	High-throughput	0.588	High
558336	RPB3 DNA-directed RNA polymerase II subunit RPB3	2	2	High-throughput	0.584	High
628616	SIS1 Protein SIS1	2	2	High-throughput	0.584	High
665120	BMH1 Protein BMH1	2	4	Small-scale	0.584	High
710943	URB1 Nucleolar pre-ribosomal-associated protein 1	2	2	Small-scale	0.584	High
754227	CIC1 Proteasome-interacting protein CIC1	2	4	High-throughput	0.584	High
755220	LRP1 Exosome complex protein LRP1	2	1	Small-scale	0.584	High
797658	RPN11 Ubiquitin carboxyl-terminal hydrolase RPN11	2	3	High-throughput	0.584	High
811815	URB2 Nucleolar pre-ribosomal-associated protein 2	2	1	High-throughput	0.584	High
861629	YG5X Putative methyltransferase YGR283C	2	3	High-throughput	0.584	High
865439	CSL4 Exosome complex component CSL4	2	1	High-throughput	0.584	High
865635	UBP10 Ubiquitin carboxyl-terminal hydrolase 10	2	8	High-throughput	0.584	High
976894	HAS1 ATP-dependent RNA helicase HAS1	2	16	High-throughput	0.584	High
979752	UTP14 U3 small nucleolar RNA-associated protein 14	2	2	High-throughput	0.584	High
985837	UTP21 U3 small nucleolar RNA-associated protein 21	2	12	Small-scale	0.584	High
1015246	MAK21 Ribosome biogenesis protein MAK21	2	8	High-throughput	0.584	High
1015629	EFG1P rRNA-processing protein EFG1	2	1	Small-scale	0.584	High
635178	YCQ6 Uncharacterized protein YCR016W	2	0	High-throughput	0.576	High
367124	HSP82 ATP-dependent molecular chaperone HSP82	2	2	Small-scale	0.571	High
811582	MPP10 U3 small nucleolar RNA-associated protein MPP10	2	2	Small-scale	0.571	High
564398	RL8A Large ribosomal subunit protein eL8A	1	9	Small-scale	0.553	High
820247	RS12 Small ribosomal subunit protein eS12	1	2	High-throughput	0.553	High
420195	TOP2 DNA topoisomerase 2	1	2	High-throughput	0.536	High
425398	PHO4 Phosphate system positive regulatory protein PHO4	1	1	High-throughput	0.536	High
550154	CSK21 Casein kinase II subunit alpha	1	4	High-throughput	0.536	High
676493	XPO1 Exportin-1	1	4	High-throughput	0.536	High
864640	BRE5 UBP3-associated protein BRE5	1	2	High-throughput	0.536	High
965079	UBP3 Ubiquitin carboxyl-terminal hydrolase 3	1	5	High-throughput	0.536	High
524490	CAF20 Cap-associated protein CAF20	2	1	Small-scale	0.533	High
521162	RAD50 DNA repair protein RAD50	1	1	High-throughput	0.515	High
539909	RAD4 DNA repair protein RAD4	1	3	High-throughput	0.515	High
589112	PRP4 U4/U6 small nuclear ribonucleoprotein PRP4	1	8	High-throughput	0.515	High
763643	OAF1 Oleate-activated transcription factor 1	1	1	High-throughput	0.515	High
791294	KRI1 Protein KRI1	1	2	High-throughput	0.515	High
837436	UBP15 Ubiquitin carboxyl-terminal hydrolase 15	1	3	High-throughput	0.515	High
972944	IMA1 Importin subunit alpha	1	12	High-throughput	0.515	High
986161	IMB1 Importin subunit beta-1	1	2	High-throughput	0.515	High
477500	UBI4P Polyubiquitin [Cleaved into: Ubiquitin]	1	5	High-throughput	0.501	High
996620	RSA1 Ribosome assembly 1 protein	1	2	Small-scale	0.500	High
837392	IMDH3 Inosine-5'-monophosphate dehydrogenase 3	1	0	High-throughput	0.493	High
635716	TAH1 TPR repeat-containing protein associated with Hsp90	1	4	Small-scale	0.481	High
810457	RPA34 DNA-directed RNA polymerase I subunit RPA34	1	1	Small-scale	0.481	High
1015432	SMT3 Ubiquitin-like protein SMT3	1	3	High-throughput	0.481	High
141592	RS9A Small ribosomal subunit protein uS4A	1	5	High-throughput	0.479	High
375543	RPB1 DNA-directed RNA polymerase II subunit RPB1	1	3	High-throughput	0.479	High
392613	H2A2 Histone H2A.2	1	2	High-throughput	0.479	High
403046	ERF3 Eukaryotic peptide chain release factor GTP-binding subunit	1	3	Small-scale	0.479	High
407409	RS3 Small ribosomal subunit protein uS3	1	2	High-throughput	0.479	High
408194	RS13 Small ribosomal subunit protein uS15	1	1	High-throughput	0.479	High
408499	RS31 Ubiquitin-ribosomal protein eS31 fusion protein [Cleaved into: Ubiquitin; Small ribosomal subunit protein eS31	1	4	High-throughput	0.479	High
413780	RS14A Small ribosomal subunit protein uS11A	1	3	High-throughput	0.479	High
480388	RS6A Small ribosomal subunit protein eS6A	1	3	High-throughput	0.479	High
480955	RS8A Small ribosomal subunit protein eS8A	1	2	High-throughput	0.479	High
481089	RL23B Large ribosomal subunit protein uL14B	1	2	Small-scale	0.479	High
594088	MAK11 Protein MAK11	1	9	Small-scale	0.479	High
604643	RPA2 DNA-directed RNA polymerase I subunit RPA135	1	3	High-throughput	0.479	High
605188	XRN1 5'-3' exoribonuclease 1	1	2	High-throughput	0.479	High
606788	RPC2 DNA-directed RNA polymerase III subunit RPC2	1	3	High-throughput	0.479	High
630297	RRP43 Exosome complex component RRP43	1	1	High-throughput	0.479	High
630565	RRP7 Ribosomal RNA-processing protein 7	1	1	High-throughput	0.479	High
632158	RS2 Small ribosomal subunit protein uS5	1	3	High-throughput	0.479	High
638905	SPB4 ATP-dependent rRNA helicase SPB4	1	13	High-throughput	0.479	High
645722	RS7A Small ribosomal subunit protein eS7A	1	1	High-throughput	0.479	High
655916	GAR1 H/ACA ribonucleoprotein complex subunit GAR1	1	1	High-throughput	0.479	High
663739	TF2B Transcription initiation factor IIB	1	2	High-throughput	0.479	High
681104	HS104 Heat shock protein 104	1	3	High-throughput	0.479	High
700115	IMP3 U3 small nucleolar ribonucleoprotein protein IMP3	1	5	High-throughput	0.479	High
700697	RSSA1 Small ribosomal subunit protein uS2A	1	1	High-throughput	0.479	High
706565	RS3A1 Small ribosomal subunit protein eS1A	1	2	High-throughput	0.479	High
707162	DCA13 Protein SOF1	1	10	High-throughput	0.479	High
711093	UTP11 U3 small nucleolar RNA-associated protein 11	1	1	High-throughput	0.479	High
713039	BMH2 Protein BMH2	1	4	Small-scale	0.479	High
716010	UTP20 U3 small nucleolar RNA-associated protein 20	1	2	High-throughput	0.479	High
730743	DHR2 Probable ATP-dependent RNA helicase DHR2	1	5	High-throughput	0.479	High
730955	CENPA Histone H3-like centromeric protein CSE4	1	8	High-throughput	0.479	High
733176	DBP7 ATP-dependent RNA helicase DBP7	1	15	Small-scale	0.479	High
733619	RL1D1 Ribosome biogenesis protein UTP30	1	4	High-throughput	0.479	High
752739	RS20 Small ribosomal subunit protein uS10	1	1	High-throughput	0.479	High
755016	RRP4 Exosome complex component RRP4	1	3	High-throughput	0.479	High
758490	RRP8 25S rRNA	1	2	High-throughput	0.479	High
767093	ARB1 ABC transporter ATP-binding protein ARB1	1	4	Small-scale	0.479	High
768134	LCP5 U3 small nucleolar ribonucleoprotein protein LCP5	1	1	High-throughput	0.479	High
772360	ATAD2 ATPase histone chaperone YTA7	1	1	High-throughput	0.479	High
774024	MLP2 Protein MLP2	1	4	High-throughput	0.479	High
774298	RRT14 Regulator of rDNA transcription protein 14	1	1	High-throughput	0.479	High
774765	UTP25 U3 small nucleolar RNA-associated protein 25	1	2	High-throughput	0.479	High
774825	AIR1 Protein AIR1	1	7	Small-scale	0.479	High
775298	ULP2 Ubiquitin-like-specific protease 2	1	1	Small-scale	0.479	High
775409	FAF1 Protein FAF1	1	1	High-throughput	0.479	High
775909	DSN1 Kinetochore-associated protein DSN1	1	1	High-throughput	0.479	High
776554	RLP7 Ribosome biogenesis protein RLP7	1	3	High-throughput	0.479	High
784543	DIM1 Dimethyladenosine transferase	1	1	High-throughput	0.479	High
797422	LOC1 60S ribosomal subunit assembly/export protein LOC1	1	1	Small-scale	0.479	High
799881	ROK1 ATP-dependent RNA helicase ROK1	1	5	High-throughput	0.479	High
809606	RRP41 Exosome complex component SKI6	1	7	High-throughput	0.479	High
810958	MTR4 ATP-dependent RNA helicase DOB1	1	7	High-throughput	0.479	High
812176	MOG1 Nuclear import protein MOG1	1	1	High-throughput	0.479	High
816928	NOL10 Ribosome biogenesis protein ENP2	1	2	High-throughput	0.479	High
858913	VID30 Vacuolar import and degradation protein 30	1	5	High-throughput	0.479	High
860423	EIF2A Eukaryotic translation initiation factor 2A	1	1	High-throughput	0.479	High
860778	UTP22 U3 small nucleolar RNA-associated protein 22	1	2	High-throughput	0.479	High
860830	RRP46 Exosome complex component RRP46	1	5	High-throughput	0.479	High
861055	UTP8 U3 small nucleolar RNA-associated protein 8	1	1	High-throughput	0.479	High
861613	PXR1 Protein PXR1	1	2	High-throughput	0.479	High
865332	GIS2 Zinc finger protein GIS2	1	7	High-throughput	0.479	High
866088	NAT10 RNA cytidine acetyltransferase	1	4	High-throughput	0.479	High
866207	NAF1 H/ACA ribonucleoprotein complex non-core subunit NAF1	1	1	Small-scale	0.479	High
866291	NOP15 Ribosome biogenesis protein 15	1	5	High-throughput	0.479	High
866579	APJ1 J domain-containing protein APJ1	1	4	High-throughput	0.479	High
866639	IMP4 U3 small nucleolar ribonucleoprotein protein IMP4	1	7	High-throughput	0.479	High
872831	ORC1 Origin recognition complex subunit 1	1	4	High-throughput	0.479	High
902154	H3 Histone H3	1	8	High-throughput	0.479	High
961532	CDC14 Tyrosine-protein phosphatase CDC14	1	4	High-throughput	0.479	High
970491	UTP6 U3 small nucleolar RNA-associated protein 6	1	1	High-throughput	0.479	High
973492	NOG1 Nucleolar GTP-binding protein 1	1	5	High-throughput	0.479	High
973699	UTP17 NET1-associated nuclear protein 1	1	10	High-throughput	0.479	High
975875	TOM1 E3 ubiquitin-protein ligase TOM1	1	4	High-throughput	0.479	High
976828	TMA23 Protein TMA23	1	1	High-throughput	0.479	High
978656	UTP5 U3 small nucleolar RNA-associated protein 5	1	12	High-throughput	0.479	High
979266	UTP15 U3 small nucleolar RNA-associated protein 15	1	9	High-throughput	0.479	High
979421	BUD22 Bud site selection protein 22	1	1	High-throughput	0.479	High
979478	PUF6 Pumilio homology domain family member 6	1	2	Small-scale	0.479	High
981821	YM91 Putative methyltransferase YMR310C	1	3	High-throughput	0.479	High
983787	FCF1 rRNA-processing protein FCF1	1	3	High-throughput	0.479	High
984228	HRQ1 ATP-dependent helicase HRQ1	1	3	Small-scale	0.479	High
984329	RRP45 Exosome complex component RRP45	1	7	High-throughput	0.479	High
985411	RSA3 Ribosome assembly protein 3	1	1	High-throughput	0.479	High
985444	UTP13 U3 small nucleolar RNA-associated protein 13	1	13	High-throughput	0.479	High
986772	NEP1 Ribosomal RNA small subunit methyltransferase NEP1	1	1	High-throughput	0.479	High
987657	RRP15 Ribosomal RNA-processing protein 15	1	1	Small-scale	0.479	High
987745	URN1 Pre-mRNA-splicing factor URN1	1	1	High-throughput	0.479	High
988493	BFR2 Protein BFR2	1	2	High-throughput	0.479	High
988659	UTP4 U3 small nucleolar RNA-associated protein 4	1	12	High-throughput	0.479	High
993378	RCL1 RNA 3'-terminal phosphate cyclase-like protein	1	1	High-throughput	0.479	High
993689	RRP44 Exosome complex exonuclease DIS3	1	3	High-throughput	0.479	High
994589	RRP40 Exosome complex component RRP40	1	1	High-throughput	0.479	High
995848	SGO1 Shugoshin	1	1	High-throughput	0.479	High
996596	NCBP2 Nuclear cap-binding protein subunit 2	1	8	High-throughput	0.479	High
997067	BMS1 Ribosome biogenesis protein BMS1	1	3	High-throughput	0.479	High
1014907	FCF2 rRNA-processing protein FCF2	1	2	High-throughput	0.479	High
1015087	SAS10 Something about silencing protein 10	1	2	High-throughput	0.479	High
1015138	RRP6 Exosome complex exonuclease RRP6	1	1	High-throughput	0.479	High
1015332	UTP12 U3 small nucleolar RNA-associated protein 12	1	11	High-throughput	0.479	High
1015409	RRP42 Exosome complex component RRP42	1	7	High-throughput	0.479	High
1015496	UTP23 rRNA-processing protein UTP23	1	3	High-throughput	0.479	High
1015625	AIR2 Protein AIR2	1	7	Small-scale	0.479	High
1015626	RRP36 rRNA biogenesis protein RRP36	1	1	High-throughput	0.479	High
1015628	RRP12 Ribosomal RNA-processing protein 12	1	3	High-throughput	0.479	High
1015630	NOP10 H/ACA ribonucleoprotein complex subunit NOP10	1	2	High-throughput	0.479	High
1015631	NOP14 Nucleolar complex protein 14	1	2	High-throughput	0.479	High
1015632	PNO1 Pre-rRNA-processing protein PNO1	1	1	High-throughput	0.479	High
523329	NAT1 N-terminal acetyltransferase A complex subunit NAT1	1	4	High-throughput	0.470	High
629306	HAL4 Serine/threonine-protein kinase HAL4/SAT4	1	3	High-throughput	0.470	High
964750	BCK1 Serine/threonine-protein kinase BCK1/SLK1/SSP31	1	2	High-throughput	0.470	High
710485	TOD6 Transcriptional regulatory protein TOD6	1	0	High-throughput	0.458	High
765111	IF4F1 Eukaryotic initiation factor 4F subunit p150	1	0	Small-scale	0.458	High
797108	OTU1 Ubiquitin thioesterase OTU1	1	0	High-throughput	0.458	High
816992	MTR3 Exosome complex component MTR3	1	0	High-throughput	0.458	High
864448	MPP6 M-phase phosphoprotein 6 homolog	1	0	Small-scale	0.458	High
987078	TFC6 Transcription factor tau 91 kDa subunit	1	0	High-throughput	0.458	High
992564	CMS1 Protein CMS1	1	0	High-throughput	0.458	High
996048	MCA1 Metacaspase-1	1	0	High-throughput	0.458	High
1015021	YL11B Transposon Ty1-LR1 Gag-Pol polyprotein	1	0	High-throughput	0.458	High
1015528	NDJ1 Non-disjunction protein 1	1	0	Small-scale	0.458	High
761170	PCF11 Protein PCF11	1	2	High-throughput	0.457	High
994576	RTC1 Restriction of telomere capping protein 1	1	10	High-throughput	0.457	High
450247	HSP73 Heat shock protein SSA3	1	6	High-throughput	0.445	High
513297	SSB1 Ribosome-associated molecular chaperone SSB1	1	6	High-throughput	0.445	High
633717	MAS5 Mitochondrial protein import protein MAS5	1	4	High-throughput	0.445	High
769865	SSB2 Ribosome-associated molecular chaperone SSB2	1	6	High-throughput	0.445	High
960032	SEN1 Helicase SEN1	1	1	Small-scale	0.445	High
976003	GCN5 Histone acetyltransferase GCN5	1	11	High-throughput	0.445	High
987113	ESF1 Pre-rRNA-processing protein ESF1	1	2	High-throughput	0.445	High
987209	SP382 Pre-mRNA-splicing factor SPP382	1	0	High-throughput	0.438	High
358324	RS17A Small ribosomal subunit protein eS17A	1	2	High-throughput	0.437	High
383420	RL25 Large ribosomal subunit protein uL23	1	2	High-throughput	0.437	High
405895	RL26A Large ribosomal subunit protein uL24A	1	2	High-throughput	0.437	High
426217	RS19A Small ribosomal subunit protein eS19A	1	3	High-throughput	0.437	High
471325	RS22A Small ribosomal subunit protein uS8A	1	3	High-throughput	0.437	High
472461	RL31A Large ribosomal subunit protein eL31A	1	4	High-throughput	0.437	High
479194	RL43B Large ribosomal subunit protein eL43B	1	1	Small-scale	0.437	High
482524	RS18A Small ribosomal subunit protein uS13A	1	1	High-throughput	0.437	High
701150	SMY2 Protein SMY2	1	2	High-throughput	0.437	High
730184	RS27A Small ribosomal subunit protein eS27A	1	2	High-throughput	0.437	High
748204	AIM4 Altered inheritance of mitochondria protein 4	1	1	High-throughput	0.437	High
762692	LAA1 AP-1 accessory protein LAA1	1	1	High-throughput	0.437	High
775005	FIS1 Mitochondrial fission 1 protein	1	1	Small-scale	0.437	High
822966	VATG V-type proton ATPase subunit G	1	1	High-throughput	0.437	High
860654	PIL1 Sphingolipid long chain base-responsive protein PIL1	1	2	High-throughput	0.437	High
866695	YNF0 Uncharacterized protein YNL050C	1	1	High-throughput	0.437	High
866819	SAM50 Sorting assembly machinery 50 kDa subunit	1	1	High-throughput	0.437	High
959905	NUM1 Nuclear migration protein NUM1	1	5	High-throughput	0.437	High
967836	RS15 Small ribosomal subunit protein uS19	1	1	High-throughput	0.437	High
977488	BUL2 Ubiquitin ligase-binding protein BUL2	1	1	Small-scale	0.437	High
986330	PEX30 Peroxisomal membrane protein PEX30	1	1	Small-scale	0.437	High
991375	VAM6 Vacuolar morphogenesis protein 6	1	1	High-throughput	0.437	High
996361	RS10A Small ribosomal subunit protein eS10A	1	1	High-throughput	0.437	High
969313	UBC7 Ubiquitin-conjugating enzyme E2 7	1	3	High-throughput	0.417	High
705838	HSP78 Heat shock protein 78, mitochondrial	1	3	High-throughput	0.407	High
745413	SEA4 SEH-associated protein 4	1	1	High-throughput	0.407	High
753494	NPR3 Nitrogen permease regulator 3	1	1	High-throughput	0.407	High
772597	JEM1 DnaJ-like chaperone JEM1	1	3	High-throughput	0.407	High
773882	BNR1 BNI1-related protein 1	1	0	High-throughput	0.269	Low
873201	TMEDA Endoplasmic reticulum vesicle protein 25	1	0	High-throughput	0.269	Low
858427	SCS3 Acyl-coenzyme A diphosphatase SCS3	1	0	Small-scale	0.251	Low
747496	PHO88 SRP-independent targeting protein 3	1	0	High-throughput	0.249	Low
749085	YB8A Putative uncharacterized protein YBR285W	1	0	Small-scale	0.249	Low
976098	PEX29 Peroxisomal membrane protein PEX29	1	0	Small-scale	0.249	Low
977567	ENT5 Epsin-5	1	0	High-throughput	0.249	Low
1015633	ENV10 SRP-independent targeting protein 2	1	0	High-throughput	0.249	Low
399240	FUR4 Uracil permease	1	0	High-throughput	0.232	Low
732198	CAB3 Coenzyme A biosynthesis protein 3	1	0	High-throughput	0.232	Low
766561	PFD2 Prefoldin subunit 2	1	0	High-throughput	0.232	Low