Protein: URN1
Pre-mRNA-splicing factor URN1 (U2-U5-U6 snRNP, RES complex and NTC-interacting pre-mRNA-splicing factor 1)

Gene: URN1
Organism: Saccharomyces cerevisiae S288C
Interactions: 232
UniProt ID: Q06525

Gene Ontology (top 5):
GO:0000398 - mRNA splicing, via spliceosome
GO:0003712 - transcription coregulator activity
GO:0003723 - RNA binding
GO:0005634 - nucleus
GO:0005685 - U1 snRNP

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

692362

PRP19
Pre-mRNA-processing factor 19

2

0

High-throughput

0.633

High

987729

URN1
Pre-mRNA-splicing factor URN1

1

0

High-throughput

0.586

High

495046

HSP72
Heat shock protein SSA2

2

1

High-throughput

0.585

High

697266

BRR2
Pre-mRNA-splicing helicase BRR2

2

0

High-throughput

0.576

High

534847

RL30
Large ribosomal subunit protein eL30

2

0

High-throughput

0.569

High

965495

NOP3
Serine/arginine

2

0

High-throughput

0.569

High

629398

BUD31
Pre-mRNA-splicing factor BUD31

2

0

High-throughput

0.569

High

681018

HS104
Heat shock protein 104

2

0

High-throughput

0.547

High

343022

ENO2
Enolase 2

2

1

High-throughput

0.543

High

987735

RU2A
U2 small nuclear ribonucleoprotein A'

1

1

High-throughput

0.536

High

987742

CLF1
Pre-mRNA-splicing factor CLF1

1

1

High-throughput

0.536

High

837362

IMDH3
Inosine-5'-monophosphate dehydrogenase 3

2

2

High-throughput

0.521

High

655759

PRP45
Pre-mRNA-processing protein 45

1

0

High-throughput

0.513

High

704722

PRP8
Pre-mRNA-splicing factor 8

1

0

High-throughput

0.513

High

731776

SN114
Pre-mRNA-splicing factor SNU114

1

0

High-throughput

0.513

High

766963

RSMB
Small nuclear ribonucleoprotein-associated protein B

1

0

High-throughput

0.513

High

836940

SF3B1
U2 snRNP component HSH155

1

0

High-throughput

0.513

High

971696

CUS1
Cold sensitive U2 snRNA suppressor 1

1

0

High-throughput

0.513

High

977081

CEF1
Pre-mRNA-splicing factor CEF1

1

0

High-throughput

0.513

High

980229

RSE1
Pre-mRNA-splicing factor RSE1

1

0

High-throughput

0.513

High

985858

SN309
Pre-mRNA-splicing factor SNT309

1

0

High-throughput

0.513

High

986597

SMD2
Small nuclear ribonucleoprotein Sm D2

1

0

High-throughput

0.513

High

987744

PRP46
Pre-mRNA-splicing factor PRP46

1

0

High-throughput

0.513

High

614819

KC11
Casein kinase I homolog 1

1

1

High-throughput

0.501

High

615068

KC12
Casein kinase I homolog 2

1

1

High-throughput

0.501

High

701933

SWE1
Mitosis inhibitor protein kinase SWE1

1

1

High-throughput

0.501

High

768402

GPP2
Glycerol-1-phosphate phosphohydrolase 2

1

1

High-throughput

0.501

High

565293

SPO12
Sporulation-specific protein 12

1

0

Small-scale

0.486

High

341838

IPYR
Inorganic pyrophosphatase

1

0

High-throughput

0.480

High

412883

KAPA
cAMP-dependent protein kinase type 1

1

0

High-throughput

0.480

High

542699

TAL1
Transaldolase

1

0

High-throughput

0.480

High

589457

PRP2
Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein PRP2

1

0

High-throughput

0.480

High

613836

TKT1
Transketolase 1

1

0

High-throughput

0.480

High

682296

ACBP
Acyl-CoA-binding protein

1

0

High-throughput

0.480

High

710319

SIP2
SNF1 protein kinase subunit beta-2

1

0

High-throughput

0.480

High

759453

STM1
Suppressor protein STM1

1

0

High-throughput

0.480

High

763272

NPT1
Nicotinate phosphoribosyltransferase

1

0

High-throughput

0.480

High

812316

YJ66
Uncharacterized oxidoreductase YJR096W

1

0

High-throughput

0.480

High

832204

RIR4
Ribonucleoside-diphosphate reductase small chain 2

1

0

High-throughput

0.480

High

865226

GOR1
Glyoxylate reductase 1

1

0

High-throughput

0.480

High

985487

KYNU
Kynureninase

1

0

High-throughput

0.480

High

987734

ESA1
Histone acetyltransferase ESA1

1

0

Small-scale

0.480

High

987741

SMT3
Ubiquitin-like protein SMT3

1

0

High-throughput

0.480

High

382805

RL24A
Large ribosomal subunit protein eL24A

1

1

High-throughput

0.479

High

408473

RS31
Ubiquitin-ribosomal protein eS31 fusion protein [Cleaved into: Ubiquitin; Small ribosomal subunit protein eS31

1

2

High-throughput

0.479

High

477652

RL40A
Ubiquitin-ribosomal protein eL40A fusion protein [Cleaved into: Ubiquitin; Large ribosomal subunit protein eL40A

1

2

High-throughput

0.479

High

597905

PWP1
Periodic tryptophan protein 1

1

1

High-throughput

0.479

High

621521

RL24B
Large ribosomal subunit protein eL24B

1

1

High-throughput

0.479

High

696076

HSP79
Heat shock protein homolog SSE2

1

3

High-throughput

0.479

High

744247

MAK5
ATP-dependent RNA helicase MAK5

1

1

High-throughput

0.479

High

765070

IF4F1
Eukaryotic initiation factor 4F subunit p150

1

1

High-throughput

0.479

High

766709

NUG1
Nuclear GTP-binding protein NUG1

1

1

High-throughput

0.479

High

783303

GPP1
Glycerol-1-phosphate phosphohydrolase 1

1

1

High-throughput

0.479

High

978009

RUVB1
RuvB-like protein 1

1

1

High-throughput

0.479

High

979035

DHR1
Probable ATP-dependent RNA helicase DHR1

1

1

High-throughput

0.479

High

987745

NOP56
Nucleolar protein 56

1

1

High-throughput

0.479

High

987746

RUVB2
RuvB-like protein 2

1

1

High-throughput

0.479

High

356743

H4
Histone H4

1

0

High-throughput

0.458

High

357732

RL28
Large ribosomal subunit protein uL15

1

0

High-throughput

0.458

High

375511

RPB1
DNA-directed RNA polymerase II subunit RPB1

1

0

High-throughput

0.458

High

410186

EIF3B
Eukaryotic translation initiation factor 3 subunit B

1

0

High-throughput

0.458

High

411093

PDC1
Pyruvate decarboxylase isozyme 1

1

0

High-throughput

0.458

High

420174

TOP2
DNA topoisomerase 2

1

0

High-throughput

0.458

High

424922

IF4E
Eukaryotic translation initiation factor 4E

1

0

High-throughput

0.458

High

454927

CDC16
Anaphase-promoting complex subunit CDC16

1

0

High-throughput

0.458

High

519543

PDR1
Transcription factor PDR1

1

0

High-throughput

0.458

High

530032

STE12
Protein STE12

1

0

High-throughput

0.458

High

549509

FBRL
rRNA 2'-O-methyltransferase fibrillarin

1

0

High-throughput

0.458

High

550129

CSK21
Casein kinase II subunit alpha

1

0

High-throughput

0.458

High

586529

PRP9
Pre-mRNA-splicing factor PRP9

1

0

High-throughput

0.458

High

587888

AP1
AP-1-like transcription factor YAP1

1

0

High-throughput

0.458

High

599275

REB1
DNA-binding protein REB1

1

0

High-throughput

0.458

High

622083

SSD1
Protein SSD1

1

0

High-throughput

0.458

High

624177

DBP2
ATP-dependent RNA helicase DBP2

1

0

High-throughput

0.458

High

630094

SNT1
Probable DNA-binding protein SNT1

1

0

High-throughput

0.458

High

635929

PAT1
Deadenylation-dependent mRNA-decapping factor PAT1

1

0

High-throughput

0.458

High

636754

CDC48
Cell division control protein 48

1

0

High-throughput

0.458

High

641073

RL5
Large ribosomal subunit protein uL18

1

0

High-throughput

0.458

High

650398

SPT5
Transcription elongation factor SPT5

1

0

High-throughput

0.458

High

663406

TF2B
Transcription initiation factor IIB

1

0

High-throughput

0.458

High

665069

BMH1
Protein BMH1

1

0

High-throughput

0.458

High

692251

PAN1
Actin cytoskeleton-regulatory complex protein PAN1

1

0

High-throughput

0.458

High

696173

SWI3
SWI/SNF complex subunit SWI3

1

0

High-throughput

0.458

High

703856

PRS6B
26S proteasome regulatory subunit 6B homolog

1

0

High-throughput

0.458

High

703964

PRS7
26S proteasome regulatory subunit 7 homolog

1

0

High-throughput

0.458

High

728323

DEF1
RNA polymerase II degradation factor 1

1

0

High-throughput

0.458

High

730679

EF1G2
Elongation factor 1-gamma 2

1

0

High-throughput

0.458

High

733313

SET3
SET domain-containing protein 3

1

0

High-throughput

0.458

High

748091

NTC20
Pre-mRNA-splicing factor NTC20

1

0

High-throughput

0.458

High

755459

TRA1
Transcription-associated protein 1

1

0

High-throughput

0.458

High

755868

LSM12
Protein LSM12

1

0

High-throughput

0.458

High

763528

NUP60
Nucleoporin NUP60

1

0

High-throughput

0.458

High

763591

ECM1
Shuttling pre-60S factor ECM1

1

0

High-throughput

0.458

High

766475

EDC3
Enhancer of mRNA-decapping protein 3

1

0

High-throughput

0.458

High

770532

EIF3I
Eukaryotic translation initiation factor 3 subunit I

1

0

High-throughput

0.458

High

784862

T2FA
Transcription initiation factor IIF subunit alpha

1

0

High-throughput

0.458

High

784882

T2FB
Transcription initiation factor IIF subunit beta

1

0

High-throughput

0.458

High

791184

PFS2
Polyadenylation factor subunit 2

1

0

High-throughput

0.458

High

805132

SAC3
Nuclear mRNA export protein SAC3

1

0

High-throughput

0.458

High

805192

SUM1
Suppressor of mar1-1 protein

1

0

High-throughput

0.458

High

810593

ALB1
Ribosome biogenesis protein ALB1

1

0

High-throughput

0.458

High

837540

PSP2
Protein PSP2

1

0

High-throughput

0.458

High

860750

UTP22
U3 small nucleolar RNA-associated protein 22

1

0

High-throughput

0.458

High

865802

APC1
Anaphase-promoting complex subunit 1

1

0

High-throughput

0.458

High

963177

RPA49
DNA-directed RNA polymerase I subunit RPA49

1

0

High-throughput

0.458

High

965044

UBP3
Ubiquitin carboxyl-terminal hydrolase 3

1

0

High-throughput

0.458

High

970995

ABF2
ARS-binding factor 2, mitochondrial

1

0

High-throughput

0.458

High

977169

CLU
Clustered mitochondria protein 1

1

0

High-throughput

0.458

High

981829

YM94
Uncharacterized protein YMR315W

1

0

High-throughput

0.458

High

982883

RRP5
rRNA biogenesis protein RRP5

1

0

High-throughput

0.458

High

984166

RT103
Regulator of Ty1 transposition protein 103

1

0

High-throughput

0.458

High

987732

PUF3
mRNA-binding protein PUF3

1

0

High-throughput

0.458

High

987736

NEW1
[NU+] prion formation protein 1

1

0

High-throughput

0.458

High

987737

YL11B
Transposon Ty1-LR1 Gag-Pol polyprotein

1

0

High-throughput

0.458

High

987748

HSH49
Protein HSH49

1

0

High-throughput

0.458

High

634093

YCC1
Putative uncharacterized protein YCL021W

1

1

High-throughput

0.457

High

648247

KCC1
Calcium/calmodulin-dependent protein kinase I

1

1

High-throughput

0.457

High

740818

ADCS
Aminodeoxychorismate synthase

1

1

High-throughput

0.457

High

987743

PMG3
Phosphoglycerate mutase 3

1

1

High-throughput

0.457

High

492536

HSP71
Heat shock protein SSA1

1

1

High-throughput

0.445

High

695597

HSP7F
Heat shock protein homolog SSE1

1

3

High-throughput

0.445

High

342118

ATPB
ATP synthase subunit beta, mitochondrial

1

1

High-throughput

0.437

High

342779

ENO1
Enolase 1

1

1

High-throughput

0.437

High

343698

PMG1
Phosphoglycerate mutase 1

1

1

High-throughput

0.437

High

403029

ERF3
Eukaryotic peptide chain release factor GTP-binding subunit

1

1

High-throughput

0.437

High

556314

VATB
V-type proton ATPase subunit B

1

1

High-throughput

0.437

High

562289

PFKA1
ATP-dependent 6-phosphofructokinase subunit alpha

1

1

High-throughput

0.437

High

562440

PFKA2
ATP-dependent 6-phosphofructokinase subunit beta

1

1

High-throughput

0.437

High

566665

VATA
V-type proton ATPase catalytic subunit A

1

2

High-throughput

0.437

High

608814

KCC2
Calcium/calmodulin-dependent protein kinase II

1

1

High-throughput

0.437

High

698221

YME1
Mitochondrial inner membrane i-AAA protease supercomplex subunit YME1

1

1

High-throughput

0.437

High

752399

IMDH2
Inosine-5'-monophosphate dehydrogenase 2

1

2

High-throughput

0.437

High

765162

IF4F2
Eukaryotic initiation factor 4F subunit p130

1

1

High-throughput

0.437

High

774530

SLM1
Phosphatidylinositol 4,5-bisphosphate-binding protein SLM1

1

1

High-throughput

0.437

High

817355

ASK10
Activator of SKN7 protein 10

1

1

High-throughput

0.437

High

837297

IMDH4
Inosine-5'-monophosphate dehydrogenase 4

1

2

High-throughput

0.437

High

859636

LSG1
Large subunit GTPase 1

1

1

High-throughput

0.437

High

860617

PIL1
Sphingolipid long chain base-responsive protein PIL1

1

1

High-throughput

0.437

High

962632

ACAC
Acetyl-CoA carboxylase

1

1

High-throughput

0.437

High

987738

LSP1
Sphingolipid long chain base-responsive protein LSP1

1

1

High-throughput

0.437

High

987747

NOP58
Nucleolar protein 58

1

1

High-throughput

0.437

High

512849

SSB1
Ribosome-associated molecular chaperone SSB1

1

0

High-throughput

0.426

High

970242

SMD1
Small nuclear ribonucleoprotein Sm D1

1

0

High-throughput

0.426

High

477458

UBI4P
Polyubiquitin [Cleaved into: Ubiquitin]

1

2

High-throughput

0.408

High

748193

AIM4
Altered inheritance of mitochondria protein 4

5

0

High-throughput

0.376

High

964734

BCK1
Serine/threonine-protein kinase BCK1/SLK1/SSP31

2

0

High-throughput

0.310

High

424723

PYR1
Multifunctional protein URA2

2

0

High-throughput

0.298

High

141674

YL202
Putative uncharacterized protein YLR202C

1

0

High-throughput

0.261

Low

413723

RS14A
Small ribosomal subunit protein uS11A

1

0

High-throughput

0.261

Low

417602

PHSG
Glycogen phosphorylase

1

0

High-throughput

0.261

Low

420344

CALM
Calmodulin

1

0

High-throughput

0.261

Low

501301

PCKA
Phosphoenolpyruvate carboxykinase

1

0

High-throughput

0.261

Low

546537

AMPD
AMP deaminase

1

0

High-throughput

0.261

Low

625986

PTP1
Tyrosine-protein phosphatase 1

1

0

High-throughput

0.261

Low

677541

MLS1
Malate synthase 1

1

0

High-throughput

0.261

Low

689383

ARP2
Actin-related protein 2

1

0

High-throughput

0.261

Low

716122

THI80
Thiamine pyrophosphokinase

1

0

High-throughput

0.261

Low

733547

YK27
Putative uncharacterized protein YKR047W

1

0

High-throughput

0.261

Low

742740

PUR92
Bifunctional purine biosynthesis protein ADE17 [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase

1

0

High-throughput

0.261

Low

743954

YBQ6
Uncharacterized glycosyl hydrolase YBR056W

1

0

High-throughput

0.261

Low

748444

YB76
Putative uncharacterized protein YBR226C

1

0

High-throughput

0.261

Low

753250

6PGD1
6-phosphogluconate dehydrogenase, decarboxylating 1

1

0

High-throughput

0.261

Low

753764

TDA3
Putative oxidoreductase TDA3

1

0

High-throughput

0.261

Low

774622

PRK1
Actin-regulating kinase PRK1

1

0

High-throughput

0.261

Low

811114

YJC2
Putative uncharacterized protein YJL009W

1

0

High-throughput

0.261

Low

858794

MALX3
Oligo-1,6-glucosidase IMA1

1

0

High-throughput

0.261

Low

858979

YGV4
Uncharacterized protein YGL204C

1

0

High-throughput

0.261

Low

865524

YNW6
Putative uncharacterized protein YNL226W

1

0

High-throughput

0.261

Low

945796

PURA
Adenylosuccinate synthetase

1

0

High-throughput

0.261

Low

953549

YD271
Putative uncharacterized protein YDR271C

1

0

High-throughput

0.261

Low

977558

ENT5
Epsin-5

1

0

Small-scale

0.261

Low

984753

EIF3J
Eukaryotic translation initiation factor 3 subunit J

1

0

High-throughput

0.261

Low

987135

ATPK
ATP synthase subunit f, mitochondrial

1

0

High-throughput

0.261

Low

987740

YD061
Uncharacterized ABC transporter ATP-binding protein YDR061W

1

0

High-throughput

0.261

Low

333917

ADH1
Alcohol dehydrogenase 1

1

0

High-throughput

0.249

Low

340750

PGK
Phosphoglycerate kinase

1

0

High-throughput

0.249

Low

341731

HIS2
Histidine biosynthesis trifunctional protein [Includes: Phosphoribosyl-AMP cyclohydrolase

1

0

High-throughput

0.249

Low

343432

TPIS
Triosephosphate isomerase

1

0

High-throughput

0.249

Low

407589

RS9B
Small ribosomal subunit protein uS4B

1

0

High-throughput

0.249

Low

421697

FAS1
Fatty acid synthase subunit beta

1

0

High-throughput

0.249

Low

443955

CYAA
Adenylate cyclase

1

0

High-throughput

0.249

Low

447211

IF2B
Eukaryotic translation initiation factor 2 subunit beta

1

0

High-throughput

0.249

Low

479380

RS23B
Small ribosomal subunit protein uS12B

1

0

High-throughput

0.249

Low

480901

RS8A
Small ribosomal subunit protein eS8A

1

0

High-throughput

0.249

Low

482475

RS18A
Small ribosomal subunit protein uS13A

1

0

High-throughput

0.249

Low

498600

METK1
S-adenosylmethionine synthase 1

1

0

High-throughput

0.249

Low

537486

ALF
Fructose-bisphosphate aldolase

1

0

High-throughput

0.249

Low

544465

HSC82
ATP-dependent molecular chaperone HSC82

1

0

High-throughput

0.249

Low

549688

BGL2
Glucan 1,3-beta-glucosidase

1

0

High-throughput

0.249

Low

568352

CAP
Adenylyl cyclase-associated protein

1

0

High-throughput

0.249

Low

576018

ADT2
ADP,ATP carrier protein 2

1

0

High-throughput

0.249

Low

580587

FAS2
Fatty acid synthase subunit alpha

1

0

High-throughput

0.249

Low

629667

RV161
Reduced viability upon starvation protein 161

1

0

High-throughput

0.249

Low

635319

SYP1
Suppressor of yeast profilin deletion

1

0

High-throughput

0.249

Low

653856

KRE2
Glycolipid 2-alpha-mannosyltransferase

1

0

High-throughput

0.249

Low

681335

TPS2
Trehalose-phosphatase

1

0

High-throughput

0.249

Low

704072

PDR5
Pleiotropic ABC efflux transporter of multiple drugs

1

0

High-throughput

0.249

Low

704430

CBF5
H/ACA ribonucleoprotein complex subunit CBF5

1

0

High-throughput

0.249

Low

715859

MDJ1
DnaJ homolog 1, mitochondrial

1

0

High-throughput

0.249

Low

747043

EIF3A
Eukaryotic translation initiation factor 3 subunit A

1

0

High-throughput

0.249

Low

751423

FKS1
1,3-beta-glucan synthase component FKS1

1

0

High-throughput

0.249

Low

752686

RS20
Small ribosomal subunit protein uS10

1

0

High-throughput

0.249

Low

752979

YHI0
Putative proline--tRNA ligase YHR020W

1

0

High-throughput

0.249

Low

763911

IF2P
Eukaryotic translation initiation factor 5B

1

0

High-throughput

0.249

Low

778532

PHB1
Prohibitin-1

1

0

High-throughput

0.249

Low

784665

BNI1
Protein BNI1

1

0

High-throughput

0.249

Low

804912

SYEC
Glutamate--tRNA ligase, cytoplasmic

1

0

High-throughput

0.249

Low

810736

NET1
Nucleolar protein NET1

1

0

High-throughput

0.249

Low

814723

LCF4
Long-chain-fatty-acid--CoA ligase 4

1

0

High-throughput

0.249

Low

817598

SEC16
COPII coat assembly protein SEC16

1

0

High-throughput

0.249

Low

846312

RL9B
Large ribosomal subunit protein uL6B

1

0

High-throughput

0.249

Low

859581

MLC1
Myosin light chain 1

1

0

High-throughput

0.249

Low

859773

MNP1
Large ribosomal subunit protein bL12m

1

0

High-throughput

0.249

Low

861117

YG3A
Uncharacterized protein YGR130C

1

0

High-throughput

0.249

Low

967652

TIM44
Mitochondrial import inner membrane translocase subunit TIM44

1

0

High-throughput

0.249

Low

969370

OSH6
Oxysterol-binding protein homolog 6

1

0

High-throughput

0.249

Low

969388

RM13
Large ribosomal subunit protein mL50

1

0

High-throughput

0.249

Low

973007

MUK1
Protein MUK1

1

0

High-throughput

0.249

Low

974459

SVL3
Styryl dye vacuolar localization protein 3

1

0

High-throughput

0.249

Low

977045

TCB3
Tricalbin-3

1

0

High-throughput

0.249

Low

982683

IVY1
Protein IVY1

1

0

High-throughput

0.249

Low

987152

RGA2
Rho-type GTPase-activating protein 2

1

0

High-throughput

0.249

Low

987730

BFR2
Protein BFR2

1

0

High-throughput

0.249

Low

987731

NVJ2
Nucleus-vacuole junction protein 2

1

0

High-throughput

0.249

Low

987733

LAM6
Membrane-anchored lipid-binding protein LAM6

1

0

High-throughput

0.249

Low

987739

HER1
HMG2-induced ER-remodeling protein 1

1

0

High-throughput

0.249

Low

368427

EF1A
Elongation factor 1-alpha

1

0

High-throughput

0.232

Low

478548

HSP77
Import motor subunit, mitochondrial

1

0

High-throughput

0.232

Low

690711

ODPB
Pyruvate dehydrogenase E1 component subunit beta, mitochondrial

1

0

High-throughput

0.232

Low

810170

PFD1
Prefoldin subunit 1

1

0

High-throughput

0.232

Low

775045

YIG0
Uncharacterized protein YIL060W

1

0

High-throughput

0.213

Low


Service provided by Combinatics, Japan

Last updated: 15 Jul 2024