Protein: RL16B
Large ribosomal subunit protein uL13B (60S ribosomal protein L16-B) (L21) (RP23) (YL15)

Gene: RL16B, RPL16B
Organism: Saccharomyces cerevisiae S288C
Interactions: 175
UniProt ID: P26785

Gene Ontology (top 5):
GO:0002181 - cytoplasmic translation
GO:0003723 - RNA binding
GO:0003729 - mRNA binding
GO:0003735 - structural constituent of ribosome
GO:0005829 - cytosol

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

534903

RL3
Large ribosomal subunit protein uL3

2

3

High-throughput

0.754

High

644968

RL16A
Large ribosomal subunit protein uL13A

3

3

High-throughput

0.640

High

490506

HSP71
Heat shock protein SSA1

3

3

High-throughput

0.633

High

405962

RL33A
Large ribosomal subunit protein eL33A

1

3

High-throughput

0.618

High

645227

RL33B
Large ribosomal subunit protein eL33B

1

3

High-throughput

0.618

High

627751

SIS1
Protein SIS1

2

1

High-throughput

0.601

High

645273

SXM1
Importin beta SMX1

2

0

Small-scale

0.585

High

645271

ARX1
Probable metalloprotease ARX1

3

3

Small-scale

0.585

High

645276

RQC1
Ribosome quality control complex subunit 1

3

1

Small-scale

0.585

High

365897

HSP82
ATP-dependent molecular chaperone HSP82

2

2

High-throughput

0.584

High

406300

RL15A
Large ribosomal subunit protein eL15A

2

2

High-throughput

0.584

High

481297

RL2A
Large ribosomal subunit protein uL2A

2

6

High-throughput

0.584

High

524193

CAF20
Cap-associated protein CAF20

2

1

High-throughput

0.584

High

645191

RL14A
Large ribosomal subunit protein eL14A

2

4

High-throughput

0.584

High

645211

DHH1
ATP-dependent RNA helicase DHH1

2

5

Small-scale

0.584

High

645244

LSG1
Large subunit GTPase 1

2

6

High-throughput

0.584

High

645258

ORC1
Origin recognition complex subunit 1

2

4

High-throughput

0.558

High

645192

RPF2
Ribosome biogenesis protein RPF2

2

2

High-throughput

0.549

High

402893

ERF3
Eukaryotic peptide chain release factor GTP-binding subunit

1

4

High-throughput

0.536

High

593595

DBP4
ATP-dependent RNA helicase HCA4

1

16

High-throughput

0.536

High

596617

ODO1
2-oxoglutarate dehydrogenase, mitochondrial

1

4

High-throughput

0.536

High

635552

PWP2
Periodic tryptophan protein 2

1

5

High-throughput

0.536

High

645200

IF5
Eukaryotic translation initiation factor 5

1

3

High-throughput

0.536

High

645250

BRE5
UBP3-associated protein BRE5

1

3

High-throughput

0.536

High

645262

UBP3
Ubiquitin carboxyl-terminal hydrolase 3

1

2

High-throughput

0.536

High

645243

NSA1
Ribosome biogenesis protein NSA1

2

2

High-throughput

0.533

High

645188

AP1B1
AP-1 complex subunit beta-1

1

0

High-throughput

0.513

High

645210

PCF11
Protein PCF11

1

0

High-throughput

0.513

High

645178

XPO1
Exportin-1

1

2

High-throughput

0.489

High

145706

RL36B
Large ribosomal subunit protein eL36B

1

2

High-throughput

0.479

High

357467

RLA4
Large ribosomal subunit protein P2B

1

4

High-throughput

0.479

High

382716

RL24A
Large ribosomal subunit protein eL24A

1

4

High-throughput

0.479

High

382986

RL25
Large ribosomal subunit protein uL23

1

2

High-throughput

0.479

High

387885

RL39
Large ribosomal subunit protein eL39

1

1

High-throughput

0.479

High

399351

RLA0
Large ribosomal subunit protein uL10

1

4

High-throughput

0.479

High

399853

RLA2
Large ribosomal subunit protein P2A

1

4

High-throughput

0.479

High

404516

RL7A
Large ribosomal subunit protein uL30A

1

8

High-throughput

0.479

High

404808

RL9A
Large ribosomal subunit protein uL6A

1

4

High-throughput

0.479

High

404983

RL6B
Large ribosomal subunit protein eL6B

1

4

High-throughput

0.479

High

405142

RL17A
Large ribosomal subunit protein uL22A

1

5

High-throughput

0.479

High

405472

RL26A
Large ribosomal subunit protein uL24A

1

6

High-throughput

0.479

High

406209

RL29
Large ribosomal subunit protein eL29

1

1

High-throughput

0.479

High

406491

RL22A
Large ribosomal subunit protein eL22A

1

3

High-throughput

0.479

High

406838

RS3
Small ribosomal subunit protein uS3

1

2

Small-scale

0.479

High

410321

SC160
Protein SCP160

1

1

High-throughput

0.479

High

450401

C1TM
C-1-tetrahydrofolate synthase, mitochondrial

1

2

High-throughput

0.479

High

471881

RL27B
Large ribosomal subunit protein eL27B

1

2

High-throughput

0.479

High

477605

RL40A
Ubiquitin-ribosomal protein eL40A fusion protein [Cleaved into: Ubiquitin; Large ribosomal subunit protein eL40A

1

5

High-throughput

0.479

High

478851

RL20B
Large ribosomal subunit protein eL20B

1

2

High-throughput

0.479

High

479074

RL43B
Large ribosomal subunit protein eL43B

1

2

High-throughput

0.479

High

481603

RL18B
Large ribosomal subunit protein eL18B

1

3

High-throughput

0.479

High

481872

RL12B
Large ribosomal subunit protein uL11B

1

1

High-throughput

0.479

High

482676

RL19B
Large ribosomal subunit protein eL19

1

3

High-throughput

0.479

High

482836

RL35A
Large ribosomal subunit protein uL29A

1

3

Small-scale

0.479

High

496027

RLA3
Large ribosomal subunit protein P1B

1

3

High-throughput

0.479

High

498818

RL4A
Large ribosomal subunit protein uL4A

1

5

High-throughput

0.479

High

534706

RL30
Large ribosomal subunit protein eL30

1

2

High-throughput

0.479

High

560914

EF3A
Elongation factor 3A

1

4

High-throughput

0.479

High

564235

RL8A
Large ribosomal subunit protein eL8A

1

4

High-throughput

0.479

High

621451

RL24B
Large ribosomal subunit protein eL24B

1

4

High-throughput

0.479

High

624035

DBP2
ATP-dependent RNA helicase DBP2

1

1

High-throughput

0.479

High

634513

KRR1
KRR1 small subunit processome component

1

2

High-throughput

0.479

High

638653

SPB4
ATP-dependent rRNA helicase SPB4

1

13

High-throughput

0.479

High

640865

RL5
Large ribosomal subunit protein uL18

1

2

High-throughput

0.479

High

645174

RL16B
Large ribosomal subunit protein uL13B

1

3

High-throughput

0.479

High

645177

RL8B
Large ribosomal subunit protein eL8B

1

4

High-throughput

0.479

High

645179

HS104
Heat shock protein 104

1

2

High-throughput

0.479

High

645180

SRP21
Signal recognition particle subunit SRP21

1

1

High-throughput

0.479

High

645181

NAB2
Nuclear polyadenylated RNA-binding protein NAB2

1

1

High-throughput

0.479

High

645182

ZUO1
Zuotin

1

5

High-throughput

0.479

High

645189

EAP1
Protein EAP1

1

1

High-throughput

0.479

High

645190

EBP2
rRNA-processing protein EBP2

1

2

High-throughput

0.479

High

645194

RL32
Large ribosomal subunit protein eL32

1

3

High-throughput

0.479

High

645197

GID4
Vacuolar import and degradation protein 24

1

1

High-throughput

0.479

High

645203

RL14B
Large ribosomal subunit protein eL14B

1

4

High-throughput

0.479

High

645205

SSZ1
Ribosome-associated complex subunit SSZ1

1

2

High-throughput

0.479

High

645206

NMD3
60S ribosomal export protein NMD3

1

1

High-throughput

0.479

High

645207

RIX1
Pre-rRNA-processing protein RIX1

1

1

High-throughput

0.479

High

645209

STM1
Suppressor protein STM1

1

1

High-throughput

0.479

High

645212

LAA1
AP-1 accessory protein LAA1

1

1

High-throughput

0.479

High

645214

RBG1
Ribosome-interacting GTPase 1

1

6

High-throughput

0.479

High

645215

IF2P
Eukaryotic translation initiation factor 5B

1

7

High-throughput

0.479

High

645216

NOC2
Nucleolar complex protein 2

1

2

High-throughput

0.479

High

645217

IF4F1
Eukaryotic initiation factor 4F subunit p150

1

2

High-throughput

0.479

High

645220

RL13B
Large ribosomal subunit protein eL13B

1

5

High-throughput

0.479

High

645222

RL34B
Large ribosomal subunit protein eL34B

1

3

High-throughput

0.479

High

645225

RLP7
Ribosome biogenesis protein RLP7

1

8

High-throughput

0.479

High

645226

NOP2
25S rRNA

1

1

Small-scale

0.479

High

645228

RL10
Large ribosomal subunit protein uL16

1

3

High-throughput

0.479

High

645231

OTU1
Ubiquitin thioesterase OTU1

1

2

High-throughput

0.479

High

645232

RPN11
Ubiquitin carboxyl-terminal hydrolase RPN11

1

2

High-throughput

0.479

High

645233

RL17B
Large ribosomal subunit protein uL22B

1

5

High-throughput

0.479

High

645237

RL37A
Large ribosomal subunit protein eL37A

1

4

High-throughput

0.479

High

645238

RL38
Large ribosomal subunit protein eL38

1

1

High-throughput

0.479

High

645239

RL4B
Large ribosomal subunit protein uL4B

1

5

High-throughput

0.479

High

645240

RL37B
Large ribosomal subunit protein eL37B

1

4

High-throughput

0.479

High

645241

DXO
Decapping nuclease RAI1

1

1

Small-scale

0.479

High

645245

RL26B
Large ribosomal subunit protein uL24B

1

6

High-throughput

0.479

High

645246

EIF2A
Eukaryotic translation initiation factor 2A

1

2

High-throughput

0.479

High

645251

GIS2
Zinc finger protein GIS2

1

2

High-throughput

0.479

High

645252

JJJ1
J protein JJJ1

1

6

High-throughput

0.479

High

645255

NOP15
Ribosome biogenesis protein 15

1

4

High-throughput

0.479

High

645256

APJ1
J domain-containing protein APJ1

1

2

High-throughput

0.479

High

645259

RL22B
Large ribosomal subunit protein eL22B

1

3

High-throughput

0.479

High

645260

RL34A
Large ribosomal subunit protein eL34A

1

3

High-throughput

0.479

High

645263

RL6A
Large ribosomal subunit protein eL6A

1

4

High-throughput

0.479

High

645265

RL21A
Large ribosomal subunit protein eL21A

1

3

High-throughput

0.479

High

645266

XRN2
5'-3' exoribonuclease 2

1

3

High-throughput

0.479

High

645269

HAS1
ATP-dependent RNA helicase HAS1

1

15

High-throughput

0.479

High

645270

CLU
Clustered mitochondria protein 1

1

2

High-throughput

0.479

High

645274

DHR1
Probable ATP-dependent RNA helicase DHR1

1

3

High-throughput

0.479

High

645275

LTN1
E3 ubiquitin-protein ligase listerin

1

2

Small-scale

0.479

High

645277

IMB1
Importin subunit beta-1

1

1

Small-scale

0.479

High

645284

TMA46
Translation machinery-associated protein 46

1

1

High-throughput

0.479

High

645288

YRA1
RNA annealing protein YRA1

1

3

High-throughput

0.479

High

645290

RL7B
Large ribosomal subunit protein uL30B

1

8

High-throughput

0.479

High

645291

RL21B
Large ribosomal subunit protein eL21B

1

3

High-throughput

0.479

High

645292

RL13A
Large ribosomal subunit protein eL13A

1

5

High-throughput

0.479

High

645293

RL11B
Large ribosomal subunit protein uL5B

1

4

High-throughput

0.479

High

645185

SMY2
Protein SMY2

1

0

High-throughput

0.458

High

645208

RPN10
26S proteasome regulatory subunit RPN10

1

0

High-throughput

0.458

High

645254

NAF1
H/ACA ribonucleoprotein complex non-core subunit NAF1

1

0

Small-scale

0.458

High

645175

URA7
CTP synthase 1

1

1

High-throughput

0.445

High

645201

6PGD1
6-phosphogluconate dehydrogenase, decarboxylating 1

1

1

High-throughput

0.445

High

645218

SSB2
Ribosome-associated molecular chaperone SSB2

1

4

High-throughput

0.445

High

645219

RUXG
Small nuclear ribonucleoprotein G

1

4

High-throughput

0.445

High

645253

NOP13
Nucleolar protein 13

1

4

High-throughput

0.445

High

645268

GCN5
Histone acetyltransferase GCN5

1

2

High-throughput

0.445

High

645280

RIX7
Ribosome biogenesis ATPase RIX7

1

4

High-throughput

0.445

High

645289

MAK21
Ribosome biogenesis protein MAK21

1

5

High-throughput

0.445

High

339477

CDK1
Cyclin-dependent kinase 1

1

1

High-throughput

0.437

High

375299

RPB1
DNA-directed RNA polymerase II subunit RPB1

1

1

High-throughput

0.437

High

557917

RPB3
DNA-directed RNA polymerase II subunit RPB3

1

1

High-throughput

0.437

High

645176

TF2B
Transcription initiation factor IIB

1

1

High-throughput

0.437

High

645186

MRT4
Ribosome assembly factor MRT4

1

4

Small-scale

0.437

High

645187

PRS6A
26S proteasome regulatory subunit 6A

1

4

High-throughput

0.437

High

645193

GLYM
Serine hydroxymethyltransferase, mitochondrial

1

1

High-throughput

0.437

High

645195

RDH54
DNA repair and recombination protein RDH54

1

4

High-throughput

0.437

High

645196

NU170
Nucleoporin NUP170

1

1

High-throughput

0.437

High

645198

ENP1
Essential nuclear protein 1

1

1

High-throughput

0.437

High

645199

YB8A
Putative uncharacterized protein YBR285W

1

1

Small-scale

0.437

High

645202

ECM29
Proteasome component ECM29

1

3

High-throughput

0.437

High

645213

ECM1
Shuttling pre-60S factor ECM1

1

1

High-throughput

0.437

High

645221

TM108
Protein TMA108

1

1

High-throughput

0.437

High

645223

SNL1
HSP70 co-chaperone SNL1

1

1

Small-scale

0.437

High

645224

DSN1
Kinetochore-associated protein DSN1

1

1

High-throughput

0.437

High

645229

ELP2
Elongator complex protein 2

1

7

High-throughput

0.437

High

645230

UTP10
U3 small nucleolar RNA-associated protein 10

1

1

High-throughput

0.437

High

645234

ALB1
Ribosome biogenesis protein ALB1

1

1

High-throughput

0.437

High

645235

MOG1
Nuclear import protein MOG1

1

1

High-throughput

0.437

High

645242

VID30
Vacuolar import and degradation protein 30

1

3

High-throughput

0.437

High

645248

SDA1
Protein SDA1

1

2

High-throughput

0.437

High

645249

H1
Histone H1

1

1

High-throughput

0.437

High

645257

SAM50
Sorting assembly machinery 50 kDa subunit

1

1

High-throughput

0.437

High

645261

NUM1
Nuclear migration protein NUM1

1

3

High-throughput

0.437

High

645267

TOM1
E3 ubiquitin-protein ligase TOM1

1

4

High-throughput

0.437

High

645278

RRP15
Ribosomal RNA-processing protein 15

1

1

Small-scale

0.437

High

645279

VAM6
Vacuolar morphogenesis protein 6

1

3

High-throughput

0.437

High

645281

SGO1
Shugoshin

1

1

High-throughput

0.437

High

645283

AP3D
AP-3 complex subunit delta

1

2

High-throughput

0.437

High

645286

REXO3
RNA exonuclease 3

1

2

High-throughput

0.437

High

645287

RRP6
Exosome complex exonuclease RRP6

1

1

High-throughput

0.437

High

571878

SKI3
Superkiller protein 3

1

1

High-throughput

0.407

High

626013

MED19
Mediator of RNA polymerase II transcription subunit 19

1

1

High-throughput

0.407

High

645183

SLA1
Actin cytoskeleton-regulatory complex protein SLA1

1

1

High-throughput

0.407

High

645285

NOP53
Ribosome biogenesis protein NOP53

1

2

Small-scale

0.407

High

645282

SYC1
Protein SYC1

1

0

High-throughput

0.279

Low

619417

PSA2
Proteasome subunit alpha type-2

1

0

High-throughput

0.249

Low

645184

TIM23
Mitochondrial import inner membrane translocase subunit TIM23

1

0

High-throughput

0.249

Low

645204

RPN1
26S proteasome regulatory subunit RPN1

1

0

High-throughput

0.249

Low

645236

VATG
V-type proton ATPase subunit G

1

0

High-throughput

0.249

Low

645247

PIL1
Sphingolipid long chain base-responsive protein PIL1

1

0

High-throughput

0.249

Low

645264

UTP6
U3 small nucleolar RNA-associated protein 6

1

0

High-throughput

0.249

Low

645272

FIN1
Filament protein FIN1

1

0

Small-scale

0.249

Low


Service provided by Combinatics, Japan

Last updated: 15 Jul 2024