Protein: VPS39
Vam6/Vps39-like protein (TRAP1-like protein) (hVam6p)

Gene: VPS39
Organism: Homo sapiens
Interactions: 51
UniProt ID: Q96JC1

Gene Ontology (top 5):
GO:0005737 - cytoplasm
GO:0005765 - lysosomal membrane
GO:0005770 - late endosome
GO:0006886 - intracellular protein transport
GO:0006914 - autophagy

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

1295093

VPS11
Vacuolar protein sorting-associated protein 11 homolog

9

16

Small-scale

0.754

High

1295087

VPS39
Vam6/Vps39-like protein

1

15

Small-scale

0.713

High

845170

RAB7A
Ras-related protein Rab-7a

2

20

Small-scale

0.619

High

882789

STX17
Syntaxin-17

2

4

Small-scale

0.612

High

1295091

EPN3
Epsin-3

3

2

High-throughput

0.609

High

1295097

TFP11
Tuftelin-interacting protein 11

2

1

High-throughput

0.606

High

776789

STAT3
Signal transducer and activator of transcription 3

2

1

High-throughput

0.594

High

1295096

UVRAG
UV radiation resistance-associated gene protein

2

3

Small-scale

0.584

High

161865

ZN263
Zinc finger protein 263

2

2

High-throughput

0.574

High

263785

PR40A
Pre-mRNA-processing factor 40 homolog A

1

8

High-throughput

0.536

High

540398

IL1R1
Interleukin-1 receptor type 1

1

5

High-throughput

0.536

High

801309

KI67
Proliferation marker protein Ki-67

1

6

High-throughput

0.536

High

804319

NOTC1
Neurogenic locus notch homolog protein 1

1

2

High-throughput

0.536

High

833500

RBM25
RNA-binding protein 25

1

10

High-throughput

0.536

High

1136833

FAXC
Failed axon connections homolog

1

2

High-throughput

0.536

High

1232789

TXND3
Thioredoxin domain-containing protein 3

1

2

High-throughput

0.536

High

1236821

ZN655
Zinc finger protein 655

1

1

High-throughput

0.536

High

1285048

ARRD3
Arrestin domain-containing protein 3

1

3

High-throughput

0.536

High

1295089

KS6C1
Ribosomal protein S6 kinase delta-1

1

8

High-throughput

0.536

High

1295095

VPS18
Vacuolar protein sorting-associated protein 18 homolog

1

16

Small-scale

0.536

High

1295100

PKHM1
Pleckstrin homology domain-containing family M member 1

1

4

Small-scale

0.536

High

1295088

RILP
Rab-interacting lysosomal protein

1

3

Small-scale

0.527

High

833158

VPS41
Vacuolar protein sorting-associated protein 41 homolog

1

17

Small-scale

0.515

High

1017756

STX4
Syntaxin-4

1

16

Small-scale

0.515

High

1051751

NPAT
Protein NPAT

1

0

High-throughput

0.513

High

1295094

GDF3
Growth/differentiation factor 3

1

0

High-throughput

0.513

High

642981

S10A4
Protein S100-A4

1

3

High-throughput

0.489

High

1159799

NFRKB
Nuclear factor related to kappa-B-binding protein

1

3

High-throughput

0.489

High

150254

AP3D1
AP-3 complex subunit delta-1

1

10

Small-scale

0.479

High

385352

NTRK1
High affinity nerve growth factor receptor

1

13

High-throughput

0.479

High

625558

CDK2
Cyclin-dependent kinase 2

1

2

High-throughput

0.479

High

1171258

TRI67
Tripartite motif-containing protein 67

1

10

High-throughput

0.479

High

1284611

VP33A
Vacuolar protein sorting-associated protein 33A

1

18

Small-scale

0.479

High

1295092

VPS16
Vacuolar protein sorting-associated protein 16 homolog

1

11

Small-scale

0.479

High

1295098

HOOK1
Protein Hook homolog 1

1

18

Small-scale

0.479

High

989058

FMR1
Fragile X messenger ribonucleoprotein 1

1

6

High-throughput

0.457

High

882507

BCAR1
Breast cancer anti-estrogen resistance protein 1

1

7

High-throughput

0.445

High

974652

MECOM
Histone-lysine N-methyltransferase MECOM

1

4

High-throughput

0.439

High

1039776

SNW1
SNW domain-containing protein 1

1

1

Small-scale

0.439

High

553447

RFA2
Replication protein A 32 kDa subunit

1

3

High-throughput

0.437

High

1236441

SIR6
NAD-dependent protein deacylase sirtuin-6

1

1

High-throughput

0.437

High

1267993

EDEM1
ER degradation-enhancing alpha-mannosidase-like protein 1

1

1

High-throughput

0.437

High

1284373

ZUP1
Zinc finger-containing ubiquitin peptidase 1

1

3

High-throughput

0.437

High

1295099

TRRAP
Transformation/transcription domain-associated protein

1

5

High-throughput

0.437

High

1295090

NDEL1
Nuclear distribution protein nudE-like 1

1

11

High-throughput

0.417

High

1174091

UBP54
Inactive ubiquitin carboxyl-terminal hydrolase 54

2

0

High-throughput

0.328

High

964400

RUNX1
Runt-related transcription factor 1

1

0

High-throughput

0.282

High

1139299

SPAT1
Spermatogenesis-associated protein 1

1

0

High-throughput

0.279

Low

1233789

MIA40
Mitochondrial intermembrane space import and assembly protein 40

1

0

High-throughput

0.279

Low

1292740

BORC6
BLOC-1-related complex subunit 6

1

0

Small-scale

0.269

Low


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Last updated: 15 Jul 2024