Protein: PRP38
Pre-mRNA-splicing factor 38 (Pre-mRNA-processing factor 38)

Gene: PRP38
Organism: Saccharomyces cerevisiae S288C
Interactions: 34
UniProt ID: Q00723

Gene Ontology (top 5):
GO:0000388 - spliceosome conformational change to release U4 (or U4atac) and U1 (or U11)
GO:0000398 - mRNA splicing, via spliceosome
GO:0005634 - nucleus
GO:0005681 - spliceosomal complex
GO:0046540 - U4/U6 x U5 tri-snRNP complex

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

747718

SP381
Pre-mRNA-splicing factor SPP381

7

0

Small-scale

0.717

High

697243

BRR2
Pre-mRNA-splicing helicase BRR2

6

0

Small-scale

0.691

High

961609

SNU23
23 kDa U4/U6.U5 small nuclear ribonucleoprotein component

4

0

Small-scale

0.663

High

746334

LSM2
U6 snRNA-associated Sm-like protein LSm2

2

1

High-throughput

0.611

High

704701

PRP8
Pre-mRNA-splicing factor 8

1

0

High-throughput

0.586

High

961602

PRP3
U4/U6 small nuclear ribonucleoprotein PRP3

2

0

High-throughput

0.585

High

795406

SMD3
Small nuclear ribonucleoprotein Sm D3

2

1

Small-scale

0.584

High

766940

RSMB
Small nuclear ribonucleoprotein-associated protein B

2

0

High-throughput

0.559

High

961610

SNU66
66 kDa U4/U6.U5 small nuclear ribonucleoprotein component

2

0

Small-scale

0.559

High

676284

XPO1
Exportin-1

1

0

High-throughput

0.513

High

381620

GAL80
Galactose/lactose metabolism regulatory protein GAL80

1

0

High-throughput

0.486

High

770322

RUXG
Small nuclear ribonucleoprotein G

1

1

High-throughput

0.479

High

811661

LSM8
U6 snRNA-associated Sm-like protein LSm8

1

2

High-throughput

0.479

High

440080

RPB2
DNA-directed RNA polymerase II subunit RPB2

1

0

High-throughput

0.458

High

558200

RPB3
DNA-directed RNA polymerase II subunit RPB3

1

0

High-throughput

0.458

High

586433

PRP6
Pre-mRNA-splicing factor 6

1

0

High-throughput

0.458

High

589092

PRP4
U4/U6 small nuclear ribonucleoprotein PRP4

1

0

High-throughput

0.458

High

731756

SN114
Pre-mRNA-splicing factor SNU114

1

0

High-throughput

0.458

High

830820

PRP31
Pre-mRNA-processing factor 31

1

0

High-throughput

0.458

High

873652

RUXF
Small nuclear ribonucleoprotein F

1

0

High-throughput

0.458

High

961600

SMD1
Small nuclear ribonucleoprotein Sm D1

1

0

High-throughput

0.458

High

961603

SMD2
Small nuclear ribonucleoprotein Sm D2

1

0

High-throughput

0.458

High

961606

DIB1
Spliceosomal protein DIB1

1

0

High-throughput

0.458

High

961607

NCBP2
Nuclear cap-binding protein subunit 2

1

0

High-throughput

0.458

High

961608

RU2A
U2 small nuclear ribonucleoprotein A'

1

0

High-throughput

0.458

High

492137

HSP71
Heat shock protein SSA1

1

1

High-throughput

0.445

High

494713

HSP72
Heat shock protein SSA2

1

1

High-throughput

0.445

High

884819

LSM3
U6 snRNA-associated Sm-like protein LSm3

1

1

High-throughput

0.445

High

512362

SSB1
Ribosome-associated molecular chaperone SSB1

1

0

High-throughput

0.426

High

692338

PRP19
Pre-mRNA-processing factor 19

1

0

Small-scale

0.426

High

961601

YD090
Uncharacterized membrane protein YDR090C

1

0

High-throughput

0.249

Low

961604

NCS1
Calcium-binding protein NCS-1

1

0

High-throughput

0.238

Low

544250

HSC82
ATP-dependent molecular chaperone HSC82

1

0

High-throughput

0.232

Low

961605

SWA2
Auxilin-like clathrin uncoating factor SWA2

1

0

High-throughput

0.232

Low


Service provided by Combinatics, Japan

Last updated: 15 Jul 2024