Protein: SRMB
ATP-dependent RNA helicase SrmB (EC 3.6.4.13)

Gene: SRMB
Organism: Escherichia coli K-12
Interactions: 41
UniProt ID: P21507

Gene Ontology (top 5):
GO:0003724 - RNA helicase activity
GO:0005524 - ATP binding
GO:0005829 - cytosol
GO:0008143 - poly(A) binding
GO:0008186 - ATP-dependent activity, acting on RNA

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

415772

TOP1
DNA topoisomerase 1

2

2

High-throughput

0.789

High

460798

RL1
Large ribosomal subunit protein uL1

2

5

High-throughput

0.759

High

465153

DEAD
ATP-dependent RNA helicase DeaD

2

18

High-throughput

0.759

High

393748

PNP
Polyribonucleotide nucleotidyltransferase

3

6

High-throughput

0.669

High

599083

RL2
Large ribosomal subunit protein uL2

3

8

High-throughput

0.657

High

599081

RLUB
Ribosomal large subunit pseudouridine synthase B

2

4

High-throughput

0.640

High

599080

RLMN
Dual-specificity RNA methyltransferase RlmN

2

1

High-throughput

0.620

High

599076

RNE
Ribonuclease E

3

3

High-throughput

0.611

High

474154

EFTU1
Elongation factor Tu 1

2

6

High-throughput

0.611

High

466041

YBCJ
Putative RNA-binding protein YbcJ

2

2

High-throughput

0.588

High

599084

RL24
Large ribosomal subunit protein uL24

2

1

High-throughput

0.588

High

442714

DNAJ
Chaperone protein DnaJ

1

5

High-throughput

0.561

High

465680

RLUC
Ribosomal large subunit pseudouridine synthase C

1

4

High-throughput

0.561

High

534554

SELB
Selenocysteine-specific elongation factor

1

7

High-throughput

0.561

High

462508

RS9
Small ribosomal subunit protein uS9

1

7

High-throughput

0.536

High

467003

DNAB
Replicative DNA helicase

1

1

High-throughput

0.536

High

599078

NIKE
Nickel import ATP-binding protein NikE

1

0

High-throughput

0.513

High

474219

EFTU2
Elongation factor Tu 2

1

6

High-throughput

0.500

High

461827

RS2
Small ribosomal subunit protein uS2

1

11

High-throughput

0.489

High

599077

FTSP
Cell division protein FtsP

1

1

High-throughput

0.489

High

599079

CBPA
Curved DNA-binding protein

1

4

High-throughput

0.489

High

599090

RLMKL
Ribosomal RNA large subunit methyltransferase K/L [Includes: 23S rRNA m2G2445 methyltransferase

1

1

High-throughput

0.489

High

461981

RS3
Small ribosomal subunit protein uS3

1

5

High-throughput

0.484

High

469148

SPOT
Bifunctional

1

2

High-throughput

0.484

High

599085

RL4
Large ribosomal subunit protein uL4

1

3

High-throughput

0.484

High

599086

RL22
Large ribosomal subunit protein uL22

1

6

High-throughput

0.484

High

459700

KPRS
Ribose-phosphate pyrophosphokinase

1

1

High-throughput

0.479

High

460568

RL7
Large ribosomal subunit protein bL12

1

0

High-throughput

0.464

High

459554

IF3
Translation initiation factor IF-3 [Cleaved into: Translation initiation factor IF-3, N-terminally processed; Translation initiation factor IF-3S]

1

0

High-throughput

0.458

High

463067

TNAA
Tryptophanase

1

0

High-throughput

0.458

High

463627

YEEX
UPF0265 protein YeeX

1

0

High-throughput

0.458

High

466355

PCNB
Poly(A) polymerase I

1

1

Small-scale

0.445

High

459994

RPPH
RNA pyrophosphohydrolase

1

1

High-throughput

0.442

High

463489

TRMB
tRNA

1

1

High-throughput

0.442

High

467978

RL23
Large ribosomal subunit protein uL23

1

1

High-throughput

0.442

High

599091

YNCE
Uncharacterized protein YncE

1

1

High-throughput

0.437

High

599089

YBJX
Uncharacterized protein YbjX

2

0

High-throughput

0.318

High

599088

YODC
Uncharacterized protein YodC

1

0

High-throughput

0.269

Low

460091

PLSB
Glycerol-3-phosphate acyltransferase

1

0

High-throughput

0.253

Low

599082

YJJU
Uncharacterized protein YjjU

1

0

High-throughput

0.249

Low

599087

LOLB
Outer-membrane lipoprotein LolB

1

0

High-throughput

0.249

Low


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Last updated: 15 Jul 2024