HitPredict

Interactor 1: SRSF6 (Q13247)
Serine/arginine-rich splicing factor 6 (Pre-mRNA-splicing factor SRP55) (Splicing factor, arginine/serine-rich 6)
Gene: SRSF6

Interactor 2: LN28A (Q9H9Z2)
Protein lin-28 homolog A (Lin-28A) (Zinc finger CCHC domain-containing protein 1)
Gene: LIN28A

Species: Homo sapiens

Source: mint

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.33	1.00	0.575

Property	Details
Experiments	34816099
Identification Methods	anti bait coimmunoprecipitation
Interaction Type	association

Property	Details
Interacting Pfam domains	CSD~RRM_1
Common GO terms	GO:0003723 - RNA binding
Homologous interactions	20

Homologous interactions (Top 20)

Color coding for hit scores

	1 344 Hs			1 209
+	Hs
		992942 SRSF1_HUMAN (3-188): 3.02e-54: 180: 36.65		LN28A_HUMAN (1-209): 2.97e-84: 250: 100.00
+	Hs
		1314623 RBM4_HUMAN (1-343): 1.17e-47: 166: 17.05		LN28A_HUMAN (1-209): 2.97e-84: 250: 100.00
+	Hs
		1028621 SRSF9_HUMAN (3-222): 5.6e-49: 165: 34.22		LN28A_HUMAN (1-209): 2.97e-84: 250: 100.00
+	Hs
		993836 SRSF4_HUMAN (1-323): 1.85e-45: 163: 63.47		LN28A_HUMAN (1-209): 2.97e-84: 250: 100.00
+	Hs
		1028828 SRSF5_HUMAN (2-180): 3.02e-46: 160: 64.25		LN28A_HUMAN (1-209): 2.97e-84: 250: 100.00
+	Hs
		1308775 RBM4B_HUMAN (1-343): 2.62e-45: 160: 18.23		LN28A_HUMAN (1-209): 2.97e-84: 250: 100.00
+	Hs
		992817 SRSF1_HUMAN (3-188): 3.02e-54: 180: 36.65		LN28B_HUMAN (11-205): 3.72e-64: 200: 66.67
+	Hs
		1028703 SRSF5_HUMAN (2-180): 3.02e-46: 160: 64.25		LN28B_HUMAN (11-205): 3.72e-64: 200: 66.67
+	Hs
		993000 SRSF1_HUMAN (3-188): 3.02e-54: 180: 36.65		YBOX2_HUMAN (16-199): 1.7e-44: 153: 23.86
+	Hs
		993874 SRSF4_HUMAN (1-323): 1.85e-45: 163: 63.47		YBOX2_HUMAN (16-199): 1.7e-44: 153: 23.86
+	Hs
		1028879 SRSF5_HUMAN (2-180): 3.02e-46: 160: 64.25		YBOX2_HUMAN (16-199): 1.7e-44: 153: 23.86
+	Hs
		931111 SRSF1_HUMAN (3-188): 3.02e-54: 180: 36.65		YBOX1_HUMAN (26-201): 4.67e-34: 125: 21.16
+	Hs
		66328 A8K1L8_HUMAN (3-188): 6.34e-54: 179: 35.60		YBOX1_HUMAN (26-201): 4.67e-34: 125: 21.16
+	Ce
		248032 RSP3_CAEEL (3-225): 9.74e-49: 166: 37.56		O62213_CAEEL (21-126): 1.03e-36: 129: 31.82
+	Hs
		563079 SRSF1_HUMAN (3-188): 3.02e-54: 180: 36.65		YBOX3_HUMAN (27-125): 7.51e-30: 115: 34.95
+	Hs
		931130 SRSF9_HUMAN (3-222): 5.6e-49: 165: 34.22		YBOX1_HUMAN (26-201): 4.67e-34: 125: 21.16
+	Hs
		931131 SRSF5_HUMAN (2-180): 3.02e-46: 160: 64.25		YBOX1_HUMAN (26-201): 4.67e-34: 125: 21.16
+	Hs
		563084 SRSF5_HUMAN (2-180): 3.02e-46: 160: 64.25		YBOX3_HUMAN (27-125): 7.51e-30: 115: 34.95
+	Hs
		563085 SRSF6_HUMAN (1-323): 3.2e-43: 154: 100.00		YBOX3_HUMAN (27-125): 7.51e-30: 115: 34.95
+	Hs
		914744 SRSF6_HUMAN (1-323): 3.2e-43: 154: 100.00		CNBP_HUMAN (123-200): 4.23e-16: 74.6: 23.75