HitPredict

Interactor 1: AGL11 (Q38836)
Agamous-like MADS-box protein AGL11 (Protein SEEDSTICK)
Gene: AGL11

Interactor 2: TT16 (Q8RYD9)
Protein TRANSPARENT TESTA 16 (Arabidopsis BSISTER MADS-box protein)
Gene: TT16

Species: Arabidopsis thaliana

Source: intact

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.53	1.00	0.730

Property	Details
Experiments	16925602, 16080001
Identification Methods	three hybrid
Interaction Type	physical association

Property	Details
Interacting Pfam domains	K-box~K-box, SRF-TF~SRF-TF
Common GO terms	GO:0000978 - RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634 - nucleus GO:0045944 - positive regulation of transcription by RNA polymerase II GO:0046983 - protein dimerization activity
Homologous interactions	18

Homologous interactions

Color coding for hit scores

	1 230 At			1 252
+	Os
		1014693 MADS1_ORYSJ (1-230): 1.5e-71: 220: 38.10		MADS6_ORYSJ (1-236): 6.89e-67: 209: 32.26
+	Os
		1114560 MADS8_ORYSJ (1-230): 9.07e-71: 218: 38.63		MADS3_ORYSJ (1-235): 5.01e-67: 209: 32.51
+	Os
		1150822 MADS8_ORYSJ (1-230): 9.07e-71: 218: 38.63		MADS6_ORYSJ (1-236): 6.89e-67: 209: 32.26
+	Os
		1150821 MADS6_ORYSJ (1-225): 1.88e-70: 217: 37.12		MAD17_ORYSJ (1-216): 8.68e-66: 206: 32.74
+	Os
		1001540 MADS1_ORYSJ (1-230): 1.5e-71: 220: 38.10		MADS7_ORYSJ (1-241): 2.46e-63: 200: 31.33
+	At
		571271 Q1PEU3_ARATH (1-230): 1.67e-69: 215: 38.96		AG_ARATH (2-219): 1.6e-65: 205: 32.58
+	At
		571276 AGL8_ARATH (1-223): 1.05e-69: 215: 38.70		AG_ARATH (2-219): 1.6e-65: 205: 32.58
+	At
		666778 AGL8_ARATH (1-223): 1.05e-69: 215: 38.70		AGL6_ARATH (1-247): 3.91e-65: 205: 29.32
+	Os
		1001544 MADS6_ORYSJ (1-225): 1.88e-70: 217: 37.12		MADS7_ORYSJ (1-241): 2.46e-63: 200: 31.33
+	At
		186901 AGL8_ARATH (1-223): 1.05e-69: 215: 38.70		SEP3_ARATH (1-245): 5.85e-64: 201: 31.75
+	At
		666723 AGL8_ARATH (1-223): 1.05e-69: 215: 38.70		AGL3_ARATH (1-251): 7e-63: 199: 32.41
+	At
		666708 AGL8_ARATH (1-223): 1.05e-69: 215: 38.70		SEP1_ARATH (1-228): 3.98e-61: 194: 35.50
+	At
		726571 AGL8_ARATH (1-223): 1.05e-69: 215: 38.70		AP1_ARATH (1-237): 5.51e-61: 194: 32.08
+	Os
		1000277 MADS6_ORYSJ (1-225): 1.88e-70: 217: 37.12		MAD18_ORYSJ (1-241): 2.9e-59: 189: 29.60
+	Os
		1000291 MADS6_ORYSJ (1-225): 1.88e-70: 217: 37.12		MADS5_ORYSJ (1-222): 5.55e-59: 188: 31.42
+	Os
		1150820 MADS6_ORYSJ (1-225): 1.88e-70: 217: 37.12		MAD57_ORYSJ (1-171): 2.35e-30: 114: 41.86
+	Os
		472755 MADS6_ORYSJ (1-225): 1.88e-70: 217: 37.12		MAD56_ORYSJ (1-166): 4.26e-30: 114: 41.62
+	At
		248661 AGL8_ARATH (1-223): 1.05e-69: 215: 38.70		SOC1_ARATH (1-166): 5.52e-29: 110: 41.42