HitPredict

Interactor 1: NRPBB (Q38859)
DNA-directed RNA polymerases II, IV and V subunit 11 (DNA-directed RNA polymerase II 13.6 kDa polypeptide) (DNA-directed RNA polymerase II subunit J) (DNA-directed RNA polymerase II subunit RPB11) (RNA polymerase II subunit B11)
Gene: NRPB11

Interactor 2: RPD3B (Q39212)
DNA-directed RNA polymerases IV and V subunit 3B (DNA-directed RNA polymerase II 36 kDa polypeptide B) (DNA-directed RNA polymerase II subunit RPB3-B) (RNA polymerase II subunit 3-B) (RNA polymerase II subunit B3-B)
Gene: NRPD3B

Species: Arabidopsis thaliana

Source: biogrid

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.46 1.00 0.680

The method score is based on:

Property Details
Experiments 8617787
Identification Methods two hybrid, pull down
Interaction Type direct interaction

The annotation score is based on:

Property Details
Interacting Pfam domains RNA_pol_L~RNA_pol_L_2
Common GO terms GO:0000418 - RNA polymerase IV complex
GO:0000419 - RNA polymerase V complex
GO:0001055 - RNA polymerase II activity
GO:0003677 - DNA binding
GO:0005665 - RNA polymerase II, core complex
and 1 others

more...
Homologous interactions 17

Homologous interactions

Color coding for hit scores

1 116
At

1 319
+ At
+ Hs
+ Hs
+ Hs
+ Hs
+ Hs
+ Mm
+ Dm
+ Hs
+ Sp
+ Sc
+ Sc
+ Dm
+ Sp
+ Sc
+ Ss
+ Mj

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Last updated: 15 Jul 2024