HitPredict

Interactor 1: SKP1A (Q39255)
SKP1-like protein 1A (SKP1-like 1) (UFO-binding protein 1)
Gene: SKP1A

Interactor 2: TIR1 (Q570C0)
Protein TRANSPORT INHIBITOR RESPONSE 1 (Weak ethylene-insensitive protein 1)
Gene: TIR1

Species: Arabidopsis thaliana

Source: intact

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.95 1.00 0.980

The method score is based on:

Property Details
Experiments 27618443, 12782725, 10398681, 12795696, 16045473, 17410169, 12711337, 32612234, 23226441, unassigned2354
Identification Methods fluorescent resonance energy transfer, affinity chromatography technology, two hybrid, x-ray crystallography, protein complementation assay, molecular sieving, comigration in non denaturing gel electrophoresis, mass spectrometry studies of complexes, two hybrid array, two hybrid prey pooling approach and 2 others

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Interaction Type direct interaction, physical association, association

The annotation score is based on:

Property Details
Interacting Pfam domains F-box_5~Skp1
Common GO terms GO:0005634 - nucleus
GO:0009733 - response to auxin
GO:0009734 - auxin-activated signaling pathway
GO:0009873 - ethylene-activated signaling pathway
GO:0016567 - protein ubiquitination
and 2 others

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Homologous interactions 20

Homologous interactions (Top 20)

Color coding for hit scores

1 160
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Service provided by Combinatics, Japan

Last updated: 15 Jul 2024