Interactor 1: NRPE1 (Q5D869)
DNA-directed RNA polymerase V subunit 1 (DNA-directed RNA polymerase D subunit 1b) (AtNRPD1b) (Nuclear RNA polymerase D 1b) (DNA-directed RNA polymerase E subunit 1) (Nuclear RNA polymerase E 1) (EC 2.7.7.6) (Protein DEFECTIVE IN MERISTEM SILENCING 5) (Protein DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 3) (Protein RNA-DIRECTED DNA METHYLATION DEFECTIVE 1) (RNA polymerase IV subunit 1) (POL IV 1)
Gene: NRPE1

Interactor 2: NRPD4 (Q6DBA5)
DNA-directed RNA polymerases IV and V subunit 4 (Protein RNA-DIRECTED DNA METHYLATION 2) (RNA polymerase II, Rpb4, core protein)
Gene: NRPD4

Species: Arabidopsis thaliana

Source: biogrid

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.56 0.60 0.584

The method score is based on:

Property Details
Experiments 25561521, 19204117
Identification Methods affinity chromatography technology
Interaction Type physical association

The annotation score is based on:

Property Details
Interacting Pfam domains -
Common GO terms GO:0000418 - RNA polymerase IV complex
GO:0000419 - RNA polymerase V complex
GO:0005634 - nucleus
GO:0030422 - siRNA processing
GO:0035194 - regulatory ncRNA-mediated post-transcriptional gene silencing
Homologous interactions 8

Homologous interactions

Color coding for hit scores

1 1976
At

1 205
+ Hs
+ Bt
+ Hs
+ At
+ Sp
+ Sc
+ Hs
+ Sc

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024