HitPredict

Interactor 1: A16L1 (Q8C0J2)
Autophagy-related protein 16-1 (APG16-like 1)
Gene: Atg16l1

Interactor 2: RBCC1 (Q9ESK9)
RB1-inducible coiled-coil protein 1 (Coiled-coil-forming protein 1) (FAK family kinase-interacting protein of 200 kDa) (FIP200) (LaXp180)
Gene: Rb1cc1

Species: Mus musculus

Source: mint

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.71 0.60 0.653

The method score is based on:

Property Details
Experiments 23392225, 23262492
Identification Methods two hybrid, affinity chromatography technology, tandem affinity purification, anti bait coimmunoprecipitation, pull down, cross-linking study
Interaction Type direct interaction, physical association, association

The annotation score is based on:

Property Details
Interacting Pfam domains -
Common GO terms GO:0000045 - autophagosome assembly
GO:0000421 - autophagosome membrane
GO:0005737 - cytoplasm
GO:0005829 - cytosol
GO:0010508 - positive regulation of autophagy
and 1 others

more...
Homologous interactions 20

Homologous interactions (Top 20)

Color coding for hit scores

1 607
Mm

1 1588
+ Mm
+ Hs
+ Mm
+ Zm
+ Hs
+ Hs
+ Hs
+ Mm
+ Hs
+ Hs
+ Hs
+ Hs
+ Hs
+ Hs
+ Hs
+ Hs
+ Hs
+ Hs
+ Dm
+ Hs

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024