HitPredict

Interactor 1: U1135 (Q8VY74)
U11/U12 small nuclear ribonucleoprotein 35 kDa protein (U11/U12 snRNP 35 kDa protein) (U11/U12-35K)
Gene: SNRNP35

Interactor 2: RCF3 (Q8W4B1)
RNA-binding KH domain-containing protein RCF3 (Protein ENHANCED STRESS RESPONSE 1) (Protein HIGH OSMOTIC STRESS GENE EXPRESSION 5) (Protein REGULATOR OF CBF GENE EXPRESSION 3) (Protein SHINY 1)
Gene: RCF3

Species: Arabidopsis thaliana

Source: intact

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.48	0.60	0.541

Property	Details
Experiments	21798944
Identification Methods	two hybrid, two hybrid array
Interaction Type	direct interaction, physical association

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0003729 - mRNA binding GO:0016607 - nuclear speck
Homologous interactions	20

Homologous interactions (Top 20)

Color coding for hit scores

	1 333 At			1 652
+	At
		1258969 ORRM2_ARATH (21-143): 4.06e-37: 132: 30.77		RCF3_ARATH (1-652): 7.96e-153: 457: 100.00
+	At
		1323581 ORRM2_ARATH (21-143): 4.06e-37: 132: 30.77		Q9FNK3_ARATH (63-646): 1.26e-109: 346: 25.56
+	Hs
		516769 PABP1_HUMAN (55-262): 5.52e-34: 133: 15.87		IF2B2_HUMAN (290-652): 4.57e-46: 174: 13.82
+	Hs
		442644 RU17_HUMAN (48-275): 2.54e-34: 132: 28.14		IF2B2_HUMAN (290-652): 4.57e-46: 174: 13.82
+	Hs
		128007 PABP1_HUMAN (55-262): 5.52e-34: 133: 15.87		IF2B3_HUMAN (276-652): 6.06e-42: 162: 15.53
+	Hs
		127993 RU17_HUMAN (48-275): 2.54e-34: 132: 28.14		IF2B3_HUMAN (276-652): 6.06e-42: 162: 15.53
+	Hs
		128165 PABP4_HUMAN (55-262): 2.74e-33: 131: 14.90		IF2B3_HUMAN (276-652): 6.06e-42: 162: 15.53
+	Hs
		516722 PABP1_HUMAN (55-262): 5.52e-34: 133: 15.87		IF2B1_HUMAN (233-652): 7.13e-38: 150: 13.15
+	Hs
		442556 RU17_HUMAN (48-275): 2.54e-34: 132: 28.14		IF2B1_HUMAN (233-652): 7.13e-38: 150: 13.15
+	Hs
		680479 TIA1_HUMAN (59-277): 9.78e-40: 145: 14.93		FUBP3_HUMAN (69-307): 2.1e-22: 103: 14.23
+	Hs
		516642 PABP1_HUMAN (55-262): 5.52e-34: 133: 15.87		FUBP3_HUMAN (69-307): 2.1e-22: 103: 14.23
+	Hs
		442399 RU17_HUMAN (48-275): 2.54e-34: 132: 28.14		FUBP3_HUMAN (69-307): 2.1e-22: 103: 14.23
+	Hs
		1031431 PABP4_HUMAN (55-262): 2.74e-33: 131: 14.90		FUBP3_HUMAN (69-307): 2.1e-22: 103: 14.23
+	Hs
		516439 PABP1_HUMAN (55-262): 5.52e-34: 133: 15.87		HNRPK_HUMAN (2-143): 2.81e-16: 83.9: 24.65
+	Mm
		665747 PABP1_MOUSE (55-262): 7.33e-34: 133: 15.87		HNRPK_MOUSE (2-143): 2.81e-16: 83.9: 24.65
+	Hs
		441999 RU17_HUMAN (48-275): 2.54e-34: 132: 28.14		HNRPK_HUMAN (2-143): 2.81e-16: 83.9: 24.65
+	Mm
		857294 TIA1_MOUSE (59-277): 1.41e-39: 145: 14.93		PCBP1_MOUSE (54-131): 7.26e-09: 60: 27.85
+	Hs
		516531 PABP1_HUMAN (55-262): 5.52e-34: 133: 15.87		PCBP2_HUMAN (569-652): 4.22e-10: 63.9: 23.26
+	Hs
		516530 PABP1_HUMAN (55-262): 5.52e-34: 133: 15.87		PCBP1_HUMAN (54-131): 7.26e-09: 60: 27.85
+	Hs
		442176 RU17_HUMAN (48-275): 2.54e-34: 132: 28.14		PCBP1_HUMAN (54-131): 7.26e-09: 60: 27.85