HitPredict

Interactor 1: U1135 (Q8VY74)
U11/U12 small nuclear ribonucleoprotein 35 kDa protein (U11/U12 snRNP 35 kDa protein) (U11/U12-35K)
Gene: SNRNP35

Interactor 2: SL30A (Q9LHP2)
Serine/arginine-rich SC35-like splicing factor SCL30A (At-SCL30A) (AtSCL30A) (SC35-like splicing factor 30A) (Serine/arginine-rich splicing factor 30A)
Gene: SCL30A

Species: Arabidopsis thaliana

Source: intact

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.46	1.00	0.681

Property	Details
Experiments	15987817
Identification Methods	pull down
Interaction Type	direct interaction, physical association

Property	Details
Interacting Pfam domains	RRM_1~RRM_1
Common GO terms	GO:0000398 - mRNA splicing, via spliceosome GO:0003729 - mRNA binding GO:0016607 - nuclear speck
Homologous interactions	20

Homologous interactions (Top 20)

Color coding for hit scores

	1 333 At			1 262
+	At
		1257893 U1135_ARATH (1-333): 5.74e-49: 168: 100.00		SRC33_ARATH (1-213): 2.62e-45: 155: 74.65
+	At
		1114810 RU17_ARATH (48-333): 2.69e-46: 164: 26.89		SRC33_ARATH (1-213): 2.62e-45: 155: 74.65
+	At
		1163068 CYP59_ARATH (58-325): 2.29e-36: 138: 20.15		SRC33_ARATH (1-213): 2.62e-45: 155: 74.65
+	At
		1093116 U1135_ARATH (1-333): 5.74e-49: 168: 100.00		SRC28_ARATH (28-203): 6.84e-29: 111: 39.21
+	At
		1225827 U1135_ARATH (1-333): 5.74e-49: 168: 100.00		SRC30_ARATH (39-233): 7.56e-22: 93: 33.85
+	At
		1163067 CYP59_ARATH (58-325): 2.29e-36: 138: 20.15		SL30A_ARATH (1-262): 4.9e-32: 120: 100.00
+	At
		1093112 CYP59_ARATH (58-325): 2.29e-36: 138: 20.15		SRC28_ARATH (28-203): 6.84e-29: 111: 39.21
+	Mm
		857332 TIA1_MOUSE (59-277): 1.41e-39: 145: 14.93		SRSF2_MOUSE (32-117): 9.44e-23: 94.6: 47.67
+	Hs
		266904 PABP1_HUMAN (55-262): 5.52e-34: 133: 15.87		SRS10_HUMAN (37-238): 1.49e-25: 103: 28.25
+	Hs
		266895 RU17_HUMAN (48-275): 2.54e-34: 132: 28.14		SRS10_HUMAN (37-238): 1.49e-25: 103: 28.25
+	Hs
		516484 PABP1_HUMAN (55-262): 5.52e-34: 133: 15.87		ELAV2_HUMAN (30-119): 2.43e-24: 101: 30.00
+	Mm
		665745 TIA1_MOUSE (59-277): 1.41e-39: 145: 14.93		PABP1_MOUSE (25-126): 3.84e-19: 88.3: 21.57
+	At
		1163062 CYP59_ARATH (58-325): 2.29e-36: 138: 20.15		SRC30_ARATH (39-233): 7.56e-22: 93: 33.85
+	Hs
		680439 TIA1_HUMAN (59-277): 9.78e-40: 145: 14.93		TIAR_HUMAN (31-230): 2.87e-17: 82.1: 16.18
+	Hs
		516495 PABP1_HUMAN (55-262): 5.52e-34: 133: 15.87		PABP4_HUMAN (25-126): 1.08e-20: 92.9: 19.61
+	Sc
		376562 PABP_YEAST (46-263): 4.76e-34: 133: 15.14		PABP_YEAST (17-126): 1.41e-20: 92.5: 17.27
+	Hs
		516339 PABP1_HUMAN (55-262): 5.52e-34: 133: 15.87		PABP1_HUMAN (25-126): 3.24e-19: 88.7: 21.57
+	Hs
		516744 PABP1_HUMAN (55-262): 5.52e-34: 133: 15.87		PPIE_HUMAN (39-138): 8.08e-20: 88.4: 32.00
+	Hs
		516689 PABP1_HUMAN (55-262): 5.52e-34: 133: 15.87		PABP3_HUMAN (25-132): 2.26e-18: 86: 21.30
+	Hs
		516471 PABP1_HUMAN (55-262): 5.52e-34: 133: 15.87		TIAR_HUMAN (31-230): 2.87e-17: 82.1: 16.18