HitPredict

Interactor 1: AGL27 (Q9AT76)
Agamous-like MADS-box protein AGL27 (MADS box FLC1-like nuclear protein) (Protein FLOWERING LOCUS M) (Protein MADS AFFECTING FLOWERING 1)
Gene: AGL27

Interactor 2: SVP (Q9FVC1)
MADS-box protein SVP (Protein SHORT VEGETATIVE PHASE)
Gene: SVP

Species: Arabidopsis thaliana

Source: intact

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.70	1.00	0.840

Property	Details
Experiments	24614351, 24030492
Identification Methods	pull down, protein complementation assay, affinity chromatography technology, two hybrid, anti tag coimmunoprecipitation, bimolecular fluorescence complementation
Interaction Type	direct interaction, physical association

Property	Details
Interacting Pfam domains	K-box~K-box, SRF-TF~SRF-TF
Common GO terms	GO:0000978 - RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003700 - DNA-binding transcription factor activity GO:0005634 - nucleus GO:0009908 - flower development and 1 others more... GO:0046983 - protein dimerization activity
Homologous interactions	20

Homologous interactions (Top 20)

Color coding for hit scores

	1 196 At			1 240
+	Os
		1014693 MADS1_ORYSJ (1-195): 5.71e-67: 207: 31.19		MADS6_ORYSJ (1-237): 3.14e-75: 230: 32.91
+	Os
		1150821 MAD17_ORYSJ (1-193): 2.43e-65: 202: 32.21		MADS6_ORYSJ (1-237): 3.14e-75: 230: 32.91
+	Os
		1001540 MADS1_ORYSJ (1-195): 5.71e-67: 207: 31.19		MADS7_ORYSJ (1-237): 4.46e-69: 214: 31.67
+	Gh
		87907 D2T2F9_GERHY (1-195): 6.76e-66: 204: 31.71		D2T2F9_GERHY (1-236): 1.01e-69: 216: 29.71
+	Gh
		87895 D2T2F9_GERHY (1-195): 6.76e-66: 204: 31.71		D2T2F8_GERHY (1-229): 9.35e-69: 213: 34.78
+	Gh
		87911 D2T2F9_GERHY (1-195): 6.76e-66: 204: 31.71		Q6EUV6_GERHY (1-236): 2.94e-68: 212: 30.09
+	Gh
		87910 D2T2F9_GERHY (1-195): 6.76e-66: 204: 31.71		D2T2G2_GERHY (1-191): 2.14e-66: 207: 37.95
+	Gh
		87912 D2T2F9_GERHY (1-195): 6.76e-66: 204: 31.71		Q6EUV7_GERHY (1-236): 9.27e-66: 205: 31.22
+	Gh
		87919 D2T2F9_GERHY (1-195): 6.76e-66: 204: 31.71		Q9ZS30_GERHY (1-224): 7.47e-65: 204: 28.26
+	At
		726587 AGL27_ARATH (1-196): 5.48e-68: 207: 100.00		AP1_ARATH (1-226): 1.43e-63: 200: 32.17
+	Px
		976567 Q9ATE6_PETHY (1-167): 2.85e-65: 202: 35.63		AGL9_PETHY (1-236): 7.21e-66: 205: 28.99
+	Px
		996231 Q9ATE6_PETHY (1-167): 2.85e-65: 202: 35.63		Q08711_PETHY (2-234): 2.19e-65: 204: 30.47
+	Os
		1014682 MADS1_ORYSJ (1-195): 5.71e-67: 207: 31.19		MAD14_ORYSJ (1-237): 8.74e-63: 198: 34.58
+	Px
		1308294 Q9ATE6_PETHY (1-167): 2.85e-65: 202: 35.63		Q9ATE2_PETHY (1-209): 6.17e-65: 203: 34.29
+	Gh
		87908 D2T2F9_GERHY (1-195): 6.76e-66: 204: 31.71		D2T2G0_GERHY (1-221): 2.65e-64: 201: 36.09
+	Px
		1114566 Q9ATE6_PETHY (1-167): 2.85e-65: 202: 35.63		AG_PETHY (1-224): 3.1e-64: 201: 29.91
+	Gh
		87909 D2T2F9_GERHY (1-195): 6.76e-66: 204: 31.71		D2T2G1_GERHY (1-238): 2.61e-63: 199: 31.41
+	Gh
		87918 D2T2F9_GERHY (1-195): 6.76e-66: 204: 31.71		Q9ZS29_GERHY (1-224): 2.15e-63: 199: 29.26
+	Os
		1000293 MAD17_ORYSJ (1-193): 2.43e-65: 202: 32.21		MADS5_ORYSJ (1-226): 1.53e-63: 199: 34.21
+	Os
		1014687 MAD17_ORYSJ (1-193): 2.43e-65: 202: 32.21		MAD14_ORYSJ (1-237): 8.74e-63: 198: 34.58