HitPredict

Interactor 1: SVP (Q9FVC1)
MADS-box protein SVP (Protein SHORT VEGETATIVE PHASE)
Gene: SVP

Interactor 2: FLC (Q9S7Q7)
MADS-box protein FLOWERING LOCUS C (MADS-box protein FLOWERING LOCUS F)
Gene: FLC

Species: Arabidopsis thaliana

Source: intact

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.74 1.00 0.865

The method score is based on:

Property Details
Experiments 18606145, 28650476, 19011118
Identification Methods affinity chromatography technology, pull down, Cr-two hybrid, validated two hybrid, two hybrid
Interaction Type physical association, direct interaction

The annotation score is based on:

Property Details
Interacting Pfam domains K-box~K-box, SRF-TF~SRF-TF
Common GO terms GO:0000978 - RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003700 - DNA-binding transcription factor activity
GO:0005634 - nucleus
GO:0009266 - response to temperature stimulus
and 5 others

more...
Homologous interactions 18

Homologous interactions

Color coding for hit scores

1 240
At

1 196
+ Os
+ Os
+ Os
+ Os
+ Os
+ Os
+ Os
+ At
+ At
+ At
+ Os
+ At
+ At
+ Os
+ At
+ At
+ Os
+ At

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024