HitPredict

Interactor 1: DDX47 (Q9H0S4)
Probable ATP-dependent RNA helicase DDX47 (EC 3.6.4.13) (DEAD box protein 47)
Gene: DDX47

Interactor 2: LN28A (Q9H9Z2)
Protein lin-28 homolog A (Lin-28A) (Zinc finger CCHC domain-containing protein 1)
Gene: LIN28A

Species: Homo sapiens

Source: mint

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.33	0.60	0.445

Property	Details
Experiments	34816099
Identification Methods	anti bait coimmunoprecipitation
Interaction Type	association

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0003723 - RNA binding GO:0005634 - nucleus GO:0005730 - nucleolus
Homologous interactions	19

Homologous interactions

Color coding for hit scores

	1 455 Hs			1 209
+	Hs
		757660 IF4A3_HUMAN (5-397): 1.51e-165: 474: 30.71		LN28B_HUMAN (11-205): 3.72e-64: 200: 66.67
+	Hs
		1271664 DDX17_HUMAN (12-396): 5.49e-127: 386: 34.77		LN28A_HUMAN (1-209): 2.97e-84: 250: 100.00
+	Hs
		571600 DDX5_HUMAN (4-448): 1.68e-126: 381: 30.42		LN28A_HUMAN (1-209): 2.97e-84: 250: 100.00
+	Hs
		134211 DDX3X_HUMAN (4-426): 4.7e-125: 379: 30.94		LN28A_HUMAN (1-209): 2.97e-84: 250: 100.00
+	Hs
		757556 IF4A3_HUMAN (5-397): 1.51e-165: 474: 30.71		YBOX1_HUMAN (26-201): 4.67e-34: 125: 21.16
+	Hs
		563028 IF4A3_HUMAN (5-397): 1.51e-165: 474: 30.71		YBOX3_HUMAN (27-125): 7.51e-30: 115: 34.95
+	Hs
		931311 DDX17_HUMAN (12-396): 5.49e-127: 386: 34.77		YBOX1_HUMAN (26-201): 4.67e-34: 125: 21.16
+	Hs
		571395 DDX5_HUMAN (4-448): 1.68e-126: 381: 30.42		YBOX1_HUMAN (26-201): 4.67e-34: 125: 21.16
+	Hs
		78151 B5BUE6_HUMAN (4-448): 7.62e-126: 380: 30.42		YBOX1_HUMAN (26-201): 4.67e-34: 125: 21.16
+	Hs
		133971 DDX3X_HUMAN (4-426): 4.7e-125: 379: 30.94		YBOX1_HUMAN (26-201): 4.67e-34: 125: 21.16
+	Hs
		1168928 DDX27_HUMAN (21-431): 4.29e-80: 265: 37.17		LN28B_HUMAN (11-205): 3.72e-64: 200: 66.67
+	Hs
		1292690 DDX27_HUMAN (21-431): 4.29e-80: 265: 37.17		YBOX2_HUMAN (16-199): 1.7e-44: 153: 23.86
+	Ec
		464324 DEAD_ECOLI (21-397): 8.06e-77: 253: 39.63		CSPE_ECOLI (37-111): 2.06e-31: 111: 37.33
+	Ec
		465120 DEAD_ECOLI (21-397): 8.06e-77: 253: 39.63		CSPC_ECOLI (37-111): 3.39e-31: 110: 37.33
+	Ec
		465119 DEAD_ECOLI (21-397): 8.06e-77: 253: 39.63		CSPA_ECOLI (39-111): 1.13e-30: 109: 41.10
+	Ec
		464297 DEAD_ECOLI (21-397): 8.06e-77: 253: 39.63		CSPD_ECOLI (41-106): 3.12e-25: 95.4: 34.85
+	Ec
		465468 RHLE_ECOLI (25-387): 6.15e-70: 230: 35.31		CSPC_ECOLI (37-111): 3.39e-31: 110: 37.33
+	Hs
		914793 DDX27_HUMAN (21-431): 4.29e-80: 265: 37.17		CNBP_HUMAN (123-200): 4.23e-16: 74.6: 23.75
+	Ec
		465431 RHLE_ECOLI (25-387): 6.15e-70: 230: 35.31		CSPA_ECOLI (39-111): 1.13e-30: 109: 41.10