HitPredict

Interactor 1: SR45 (Q9SEE9)
Serine/arginine-rich splicing factor SR45 (At-SR45) (AtSR45) (Serine/arginine-rich ribonucleoprotein 1)
Gene: SR45

Interactor 2: SRC33 (Q9SEU4)
Serine/arginine-rich SC35-like splicing factor SCL33 (At-SCL33) (AtSCL33) (SC35-like splicing factor 33) (Serine/arginine-rich splicing factor 33)
Gene: SCL33

Species: Arabidopsis thaliana

Source: intact

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.72 1.00 0.854

The method score is based on:

Property Details
Experiments 25763493, 24832081, 10593939
Identification Methods affinity chromatography technology, two hybrid, pull down
Interaction Type physical association, direct interaction

The annotation score is based on:

Property Details
Interacting Pfam domains RRM_1~RRM_1
Common GO terms GO:0000398 - mRNA splicing, via spliceosome
GO:0003723 - RNA binding
GO:0005681 - spliceosomal complex
GO:0005730 - nucleolus
GO:0005737 - cytoplasm
and 2 others

more...
Homologous interactions 17

Homologous interactions

Color coding for hit scores

1 414
At

1 287
+ At
+ At
+ At
+ Hs
+ Zm
+ At
+ Hs
+ Hs
+ Hs
+ Hs
+ Hs
+ Hs
+ Sc
+ Hs
+ Hs
+ Hs
+ Mm

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Last updated: 15 Jul 2024