HitPredict

Interactor 1: LSM3 (Q9Y7M4)
Probable U6 snRNA-associated Sm-like protein LSm3
Gene: LSM3

Interactor 2: LSM3 (Q9Y7M4)
Probable U6 snRNA-associated Sm-like protein LSm3
Gene: LSM3

Species: Schizosaccharomyces pombe 972h-

Source: biogrid

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.55 1.00 0.744

The method score is based on:

Property Details
Experiments 26771498, 22615807
Identification Methods two hybrid, x-ray crystallography
Interaction Type direct interaction, association

The annotation score is based on:

Property Details
Interacting Pfam domains LSM~LSM
Common GO terms GO:0000398 - mRNA splicing, via spliceosome
GO:0000932 - P-body
GO:0003682 - chromatin binding
GO:0003723 - RNA binding
GO:0005634 - nucleus
and 15 others

more...
Homologous interactions 16

Homologous interactions

Color coding for hit scores

1 93
Sp

1 93
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Service provided by Combinatics, Japan

Last updated: 15 Jul 2024