HitPredict

Interactor 1: SVP (Q9FVC1)
MADS-box protein SVP (Protein SHORT VEGETATIVE PHASE)
Gene: SVP

Interactor 2: AGL21 (Q9SZJ6)
Agamous-like MADS-box protein AGL21
Gene: AGL21

Species: Arabidopsis thaliana

Source: intact

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.61	1.00	0.785

Property	Details
Experiments	15805477, 28650476
Identification Methods	two hybrid, Cr-two hybrid, validated two hybrid
Interaction Type	direct interaction, physical association

Property	Details
Interacting Pfam domains	K-box~K-box, SRF-TF~SRF-TF
Common GO terms	GO:0000977 - RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0003700 - DNA-binding transcription factor activity GO:0005634 - nucleus GO:0045944 - positive regulation of transcription by RNA polymerase II GO:0046983 - protein dimerization activity
Homologous interactions	19

Homologous interactions

Color coding for hit scores

	1 240 At			1 228
+	Os
		1232163 MADS6_ORYSJ (1-237): 3.15e-75: 230: 32.91		MAD17_ORYSJ (1-226): 3.25e-72: 221: 34.65
+	Os
		1083945 MADS6_ORYSJ (1-237): 3.15e-75: 230: 32.91		MADS1_ORYSJ (1-221): 2.23e-67: 209: 40.09
+	Os
		1232162 MADS6_ORYSJ (1-237): 3.15e-75: 230: 32.91		MAD57_ORYSJ (1-217): 3.38e-65: 203: 56.25
+	At
		198843 AGL6_ARATH (1-236): 3.76e-71: 219: 32.20		SEP3_ARATH (1-223): 4.87e-68: 211: 33.77
+	Os
		1232164 MADS6_ORYSJ (1-237): 3.15e-75: 230: 32.91		MADS8_ORYSJ (1-222): 2.04e-63: 199: 30.47
+	Os
		1070463 MADS6_ORYSJ (1-237): 3.15e-75: 230: 32.91		MADS7_ORYSJ (1-227): 1.5e-62: 197: 29.66
+	Os
		1068952 MADS6_ORYSJ (1-237): 3.15e-75: 230: 32.91		MADS5_ORYSJ (1-220): 3.37e-62: 195: 37.22
+	Os
		504790 MADS6_ORYSJ (1-237): 3.15e-75: 230: 32.91		MAD56_ORYSJ (1-215): 1.54e-61: 194: 35.75
+	Os
		1068938 MADS6_ORYSJ (1-237): 3.15e-75: 230: 32.91		MAD18_ORYSJ (1-227): 7.7e-60: 190: 35.81
+	At
		711994 AGL6_ARATH (1-236): 3.76e-71: 219: 32.20		SEP1_ARATH (1-220): 2.57e-64: 201: 33.48
+	At
		608406 AGL6_ARATH (1-236): 3.76e-71: 219: 32.20		AG_ARATH (2-220): 1.31e-63: 199: 35.87
+	At
		608411 Q1PEU3_ARATH (1-236): 3.76e-71: 219: 32.20		AG_ARATH (2-220): 1.31e-63: 199: 35.87
+	Os
		1192318 MADS8_ORYSJ (1-236): 2.52e-71: 219: 30.13		MADS3_ORYSJ (1-228): 9.66e-63: 197: 35.65
+	At
		712044 AGL6_ARATH (1-236): 3.76e-71: 219: 32.20		AGL5_ARATH (2-224): 5.76e-62: 195: 33.19
+	At
		712067 AGL6_ARATH (1-236): 3.76e-71: 219: 32.20		AP1_ARATH (1-227): 1.71e-61: 194: 33.62
+	At
		60931 AGL6_ARATH (1-236): 3.76e-71: 219: 32.20		AGL16_ARATH (1-228): 2.2e-61: 193: 59.23
+	Os
		1179745 MADS6_ORYSJ (1-237): 3.15e-75: 230: 32.91		MAD13_ORYSJ (1-176): 2.83e-37: 132: 42.22
+	Os
		1179746 MADS8_ORYSJ (1-236): 2.52e-71: 219: 30.13		MAD13_ORYSJ (1-176): 2.83e-37: 132: 42.22
+	At
		712070 AGL6_ARATH (1-236): 3.76e-71: 219: 32.20		AGL15_ARATH (1-173): 3.31e-35: 127: 45.67