HitPredict

Interactor 1: LSM1 (O15116)
U6 snRNA-associated Sm-like protein LSm1 (Cancer-associated Sm-like) (Small nuclear ribonuclear CaSm)
Gene: LSM1

Interactor 2: RSMB (P14678)
Small nuclear ribonucleoprotein-associated proteins B and B' (snRNP-B) (Sm protein B/B') (Sm-B/B') (SmB/B')
Gene: SNRPB

Species: Homo sapiens

Source: biogrid

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.38	1.00	0.618

Property	Details
Experiments	29395067
Identification Methods	proximity labelling technology
Interaction Type	physical association

Property	Details
Interacting Pfam domains	LSM~LSM
Common GO terms	GO:0003723 - RNA binding GO:0005634 - nucleus GO:0005737 - cytoplasm GO:0005829 - cytosol GO:0008380 - RNA splicing
Homologous interactions	14

Homologous interactions

Color coding for hit scores

	1 133 Hs			1 240
+	Hs
		321370 LSM8_HUMAN (7-95): 2.25e-31: 108: 33.33		RSMB_HUMAN (1-168): 6.54e-43: 146: 100.00
+	Hs
		539178 LSM7_HUMAN (8-89): 4.34e-27: 98.5: 29.89		RSMB_HUMAN (1-168): 6.54e-43: 146: 100.00
+	Hs
		321392 LSM8_HUMAN (7-95): 2.25e-31: 108: 33.33		RSMN_HUMAN (1-212): 6.6e-39: 136: 92.93
+	Hs
		538899 RSMN_HUMAN (6-86): 1.43e-24: 95.8: 23.86		RSMB_HUMAN (1-168): 6.54e-43: 146: 100.00
+	Hs
		538891 RUXG_HUMAN (4-79): 1.75e-25: 93.5: 30.26		RSMB_HUMAN (1-168): 6.54e-43: 146: 100.00
+	Hs
		538826 RSMB_HUMAN (6-86): 1.43e-23: 93.1: 23.86		RSMB_HUMAN (1-168): 6.54e-43: 146: 100.00
+	Hs
		68400 RUXGL_HUMAN (4-79): 1.11e-22: 86.2: 28.95		RSMB_HUMAN (1-168): 6.54e-43: 146: 100.00
+	Hs
		912026 RUXG_HUMAN (4-79): 1.75e-25: 93.5: 30.26		RSMN_HUMAN (1-212): 6.6e-39: 136: 92.93
+	Hs
		68412 RUXGL_HUMAN (4-79): 1.11e-22: 86.2: 28.95		RSMN_HUMAN (1-212): 6.6e-39: 136: 92.93
+	Dm
		984916 RSMB_DROME (6-74): 5.11e-24: 93.1: 26.32		Q8IPZ7_DROME (8-94): 2e-26: 100: 26.44
+	Sc
		766911 RUXG_YEAST (4-78): 1.97e-21: 83.1: 31.17		RSMB_YEAST (1-86): 1.31e-24: 98.4: 45.92
+	Sc
		766934 LSM7_YEAST (8-81): 5.46e-21: 83.1: 29.27		RSMB_YEAST (1-86): 1.31e-24: 98.4: 45.92
+	Sc
		766937 LSM3_YEAST (4-87): 7.53e-21: 81.9: 23.60		RSMB_YEAST (1-86): 1.31e-24: 98.4: 45.92
+	Hs
		297811 RSMB_HUMAN (6-86): 1.43e-23: 93.1: 23.86		K0754_HUMAN (45-222): 6.43e-12: 66.9: 13.86