HitPredict

Interactor 1: MSI4 (O22607)
WD-40 repeat-containing protein MSI4 (Altered cold-responsive gene 1 protein) (Nucleosome remodeling factor complex component 4) (Protein MULTICOPY SUPPRESSOR OF IRA1 4) (AtMSI4)
Gene: MSI4

Interactor 2: HDA5 (Q8RX28)
Histone deacetylase 5 (EC 3.5.1.98)
Gene: HDA5

Species: Arabidopsis thaliana

Source: biogrid

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.65 0.60 0.625

The method score is based on:

Property Details
Experiments 25922987, 24220632
Identification Methods fluorescent resonance energy transfer, affinity chromatography technology, two hybrid
Interaction Type direct interaction, physical association

The annotation score is based on:

Property Details
Interacting Pfam domains -
Common GO terms GO:0000118 - histone deacetylase complex
GO:0005634 - nucleus
GO:0005737 - cytoplasm
GO:0009908 - flower development
GO:0048510 - regulation of timing of transition from vegetative to reproductive phase
Homologous interactions 20

Homologous interactions (Top 20)

Color coding for hit scores

1 507
At

1 660
+ Dm
+ At
+ Hs
+ Hs
+ Hs
+ Hs
+ Hs
+ Hs
+ Hs
+ Hs
+ Mm
+ Hs
+ Hs
+ Hs
+ Ce
+ Hs
+ Hs
+ Hs
+ Hs
+ At

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024