Interactor 1: O25676 (O25676)
Alternative transcription initiation factor, sigma-F (FliA)
Gene: HP_1032
Interactor 2: RPOBC (O25806)
Bifunctional DNA-directed RNA polymerase subunit beta-beta' (EC 2.7.7.6) [Includes: DNA-directed RNA polymerase subunit beta (RNA polymerase subunit beta) (Transcriptase subunit beta); DNA-directed RNA polymerase subunit beta' (RNA polymerase subunit beta') (Transcriptase subunit beta')]
Gene: RPOBC
Species: Helicobacter pylori 26695
Source: mint
Category: High-throughput
Confidence: High
| Method score | Annotation score | Interaction score |
|---|---|---|
| 0.34 | 1.00 | 0.590 |
The method score is based on:
| Property | Details |
|---|---|
| Experiments | 11196647 |
| Identification Methods | two hybrid |
| Interaction Type | physical association |
The annotation score is based on:
| Property | Details |
|---|---|
| Interacting Pfam domains | RNA_pol_Rpb1_1~Sigma70_r2, RNA_pol_Rpb2_1~Sigma70_r2, RNA_pol_Rpb2_6~Sigma70_r2, RNA_pol_Rpb2_7~Sigma70_r2, RNA_pol_Rpb1_1~Sigma70_r4, RNA_pol_Rpb1_5~Sigma70_r4, RNA_pol_Rpb2_6~Sigma70_r4 |
| Common GO terms | GO:0003677 - DNA binding GO:0003899 - DNA-directed 5'-3' RNA polymerase activity |
| Homologous interactions | 18 |
Homologous interactions
Color coding for hit scores 
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| + | Hp |   |
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| + | Nv | |
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| + | Ec | |
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| + | Ec |  |
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| + | Bs | |
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| + | Bs | |
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| + | Mp | |
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| + | Bs | |
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| + | Nv | |
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| + | Ec | |
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| + | Ec | |
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| + | Ec | |
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| + | Ss | |
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| + | Ss | |
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| + | Ss | |
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Service provided by Combinatics, Japan
Last updated: 15 Jul 2024
