HitPredict

Interactor 1: SMD1 (O42661)
Small nuclear ribonucleoprotein Sm D1 (Sm-D1) (snRNP core protein D1)
Gene: SMD1

Interactor 2: RU2A (Q9USX8)
U2 small nuclear ribonucleoprotein A' (U2 snRNP A')
Gene: lea1

Species: Schizosaccharomyces pombe 972h-

Source: biogrid

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.38	1.00	0.618

Property	Details
Experiments	24442611
Identification Methods	affinity chromatography technology
Interaction Type	physical association

Property	Details
Interacting Pfam domains	LRR_9~LSM
Common GO terms	GO:0005634 - nucleus GO:0005686 - U2 snRNP GO:0005829 - cytosol GO:0071004 - U2-type prespliceosome GO:0071014 - post-mRNA release spliceosomal complex
Homologous interactions	10

Homologous interactions

Color coding for hit scores

	1 117 Sp			1 239
+	Hs
		1204016 LSM2_HUMAN (1-94): 7.1e-34: 114: 29.17		DAA11_HUMAN (3-230): 3.4e-41: 148: 18.62
+	Hs
		453791 SMD1_HUMAN (1-96): 9.01e-35: 117: 78.13		RU2A_HUMAN (1-238): 5.86e-40: 139: 41.60
+	Sp
		1358054 SMD3_SCHPO (2-110): 3.05e-31: 108: 23.85		RU2A_SCHPO (1-239): 3.18e-43: 147: 100.00
+	Sc
		795430 SMD3_YEAST (2-101): 3.61e-28: 100: 25.00		RU2A_YEAST (1-235): 1.06e-45: 154: 24.70
+	Hs
		453941 LSM2_HUMAN (1-94): 7.1e-34: 114: 29.17		RU2A_HUMAN (1-238): 5.86e-40: 139: 41.60
+	Hs
		453793 SMD3_HUMAN (2-107): 7.27e-32: 110: 23.59		RU2A_HUMAN (1-238): 5.86e-40: 139: 41.60
+	Sc
		970249 SMD1_YEAST (1-114): 2.03e-25: 94.6: 39.86		RU2A_YEAST (1-235): 1.06e-45: 154: 24.70
+	Dm
		218366 SMD3_DROME (2-108): 1.11e-31: 110: 21.50		RU2A_DROME (1-239): 1.81e-36: 131: 36.40
+	Hs
		453789 RUXF_HUMAN (3-69): 1.72e-24: 90.4: 31.34		RU2A_HUMAN (1-238): 5.86e-40: 139: 41.60
+	Sc
		767843 LSM4_YEAST (1-98): 1.92e-16: 72.7: 23.85		RU2A_YEAST (1-235): 1.06e-45: 154: 24.70