HitPredict

Interactor 1: RFOX2 (O43251)
RNA binding protein fox-1 homolog 2 (Fox-1 homolog B) (Hexaribonucleotide-binding protein 2) (RNA-binding motif protein 9) (RNA-binding protein 9) (Repressor of tamoxifen transcriptional activity)
Gene: RBFOX2

Interactor 2: RBM39 (Q14498)
RNA-binding protein 39 (CAPER alpha) (CAPERalpha) (Hepatocellular carcinoma protein 1) (RNA-binding motif protein 39) (RNA-binding region-containing protein 2) (Splicing factor HCC1)
Gene: RBM39

Species: Homo sapiens

Source: biogrid

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.38	1.00	0.618

Property	Details
Experiments	28302793
Identification Methods	affinity chromatography technology
Interaction Type	physical association

Property	Details
Interacting Pfam domains	RRM_1~RRM_1
Common GO terms	GO:0003723 - RNA binding GO:0005654 - nucleoplasm GO:0006397 - mRNA processing GO:0008380 - RNA splicing
Homologous interactions	19

Homologous interactions

Color coding for hit scores

	1 390 Hs			1 530
+	Hs
		1054335 SAFB1_HUMAN (14-214): 5.77e-42: 159: 21.36		RBM39_HUMAN (1-530): 2.78e-101: 316: 100.00
+	Hs
		1049456 SAFB2_HUMAN (14-203): 1.29e-41: 158: 20.51		RBM39_HUMAN (1-530): 2.78e-101: 316: 100.00
+	Hs
		1054620 RFOX1_HUMAN (19-390): 3.82e-40: 148: 59.46		RBM39_HUMAN (1-530): 2.78e-101: 316: 100.00
+	Hs
		1031328 PABP4_HUMAN (22-287): 1.65e-36: 142: 13.87		RBM39_HUMAN (1-530): 2.78e-101: 316: 100.00
+	Hs
		1031490 PABP4_HUMAN (22-287): 1.65e-36: 142: 13.87		PUF60_HUMAN (141-513): 7.12e-66: 225: 19.41
+	Hs
		474021 PAB4L_HUMAN (31-303): 5.12e-41: 150: 14.59		PABP4_HUMAN (41-422): 3.94e-60: 211: 17.22
+	Hs
		516495 PABP4_HUMAN (22-287): 1.65e-36: 142: 13.87		PABP1_HUMAN (41-426): 4.09e-61: 214: 19.08
+	Hs
		516339 PABP1_HUMAN (22-296): 2.88e-35: 138: 15.55		PABP1_HUMAN (41-426): 4.09e-61: 214: 19.08
+	Hs
		198894 RFOX2_HUMAN (1-390): 1.43e-65: 215: 100.00		SF3B4_HUMAN (238-395): 5.66e-23: 103: 22.79
+	Hs
		198880 RFOX2_HUMAN (1-390): 1.43e-65: 215: 100.00		ELAV2_HUMAN (434-530): 7.45e-16: 81.1: 10.89
+	Hs
		198951 RFOX2_HUMAN (1-390): 1.43e-65: 215: 100.00		MSI2H_HUMAN (149-309): 3.89e-15: 78.6: 28.57
+	Hs
		198923 RFOX2_HUMAN (1-390): 1.43e-65: 215: 100.00		RBM23_HUMAN (422-503): 5.12e-10: 63.8: 15.12
+	Zm
		111724 K7TYT2_MAIZE (4-386): 3.66e-51: 179: 14.46		K7TYT2_MAIZE (136-341): 3.37e-15: 79.7: 27.01
+	Hs
		1020262 SAFB1_HUMAN (14-214): 5.77e-42: 159: 21.36		ELAV2_HUMAN (434-530): 7.45e-16: 81.1: 10.89
+	Hs
		1020256 SAFB2_HUMAN (14-203): 1.29e-41: 158: 20.51		ELAV2_HUMAN (434-530): 7.45e-16: 81.1: 10.89
+	Hs
		474019 PAB4L_HUMAN (31-303): 5.12e-41: 150: 14.59		ELAV2_HUMAN (434-530): 7.45e-16: 81.1: 10.89
+	Hs
		1020249 PABP4_HUMAN (22-287): 1.65e-36: 142: 13.87		ELAV2_HUMAN (434-530): 7.45e-16: 81.1: 10.89
+	Hs
		162035 PABP4_HUMAN (22-287): 1.65e-36: 142: 13.87		HNRDL_HUMAN (144-309): 3.62e-15: 79.7: 31.93
+	Hs
		161948 PABP1_HUMAN (22-296): 2.88e-35: 138: 15.55		HNRDL_HUMAN (144-309): 3.62e-15: 79.7: 31.93