HitPredict

Interactor 1: DDB1B (O49552)
DNA damage-binding protein 1b (UV-damaged DNA-binding protein 1b) (DDB1b)
Gene: DDB1B

Interactor 2: VIP3 (Q9SZQ5)
WD repeat-containing protein VIP3 (Protein BOUQUET-1) (boq-1) (Protein SKI8 homolog) (Protein VERNALIZATION INDEPENDENCE 3) (Protein ZWERGERL) (zwg)
Gene: VIP3

Species: Arabidopsis thaliana

Source: biogrid

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.38	1.00	0.618

Property	Details
Experiments	18223036
Identification Methods	affinity chromatography technology
Interaction Type	physical association

Property	Details
Interacting Pfam domains	CPSF_A~WD40, MMS1_N~WD40
Common GO terms	GO:0005634 - nucleus GO:0005829 - cytosol
Homologous interactions	15

Homologous interactions

Color coding for hit scores

	1 1088 At			1 321
+	At
		1340746 DDB1A_ARATH (1-1088): 0: 1312: 91.27		VIP3_ARATH (1-321): 2.4e-94: 284: 100.00
+	Hs
		1082381 DDB1_HUMAN (3-1088): 0: 1202: 51.13		SKI8_HUMAN (10-319): 1.62e-62: 202: 37.50
+	Mm
		1112307 DDB1_MOUSE (3-1088): 0: 1204: 51.22		SKI8_MOUSE (10-319): 1.23e-61: 200: 37.18
+	Hs
		903254 DDB1_HUMAN (3-1088): 0: 1202: 51.13		WDR5_HUMAN (142-321): 8.86e-55: 183: 27.78
+	Hs
		1082263 DDB1_HUMAN (3-1088): 0: 1202: 51.13		WDR5B_HUMAN (122-319): 4.76e-52: 176: 27.78
+	Hs
		1082460 DDB1_HUMAN (3-1088): 0: 1202: 51.13		FBW1A_HUMAN (141-321): 8.29e-35: 135: 21.74
+	Hs
		1082327 DDB1_HUMAN (3-1088): 0: 1202: 51.13		SNR40_HUMAN (1-129): 1.31e-27: 112: 19.71
+	Mm
		1112269 DDB1_MOUSE (3-1088): 0: 1204: 51.22		WDR3_MOUSE (40-319): 4.05e-18: 87: 24.91
+	Hs
		1073144 SF3B3_HUMAN (3-1085): 0: 1013: 21.29		SKI8_HUMAN (10-319): 1.62e-62: 202: 37.50
+	Hs
		1073094 SF3B3_HUMAN (3-1085): 0: 1013: 21.29		FBXW7_HUMAN (1-224): 1.51e-49: 177: 22.71
+	Hs
		1073192 SF3B3_HUMAN (3-1085): 0: 1013: 21.29		FBW1A_HUMAN (141-321): 8.29e-35: 135: 21.74
+	Hs
		1073168 SF3B3_HUMAN (3-1085): 0: 1013: 21.29		NLE1_HUMAN (2-130): 3.76e-34: 132: 20.16
+	Hs
		197009 CPSF1_HUMAN (3-519): 7.47e-118: 398: 17.30		PRP4_HUMAN (89-320): 2.54e-44: 160: 21.98
+	Hs
		1014208 CPSF1_HUMAN (3-519): 7.47e-118: 398: 17.30		NLE1_HUMAN (2-130): 3.76e-34: 132: 20.16
+	Hs
		1014128 CPSF1_HUMAN (3-519): 7.47e-118: 398: 17.30		TAF5_HUMAN (21-319): 3.45e-12: 68.9: 25.25