HitPredict

Interactor 1: HNRPQ (O60506)
Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q) (Glycine- and tyrosine-rich RNA-binding protein) (GRY-RBP) (NS1-associated protein 1) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein)
Gene: SYNCRIP

Interactor 2: HNRPU (Q00839)
Heterogeneous nuclear ribonucleoprotein U (hnRNP U) (GRIP120) (Nuclear p120 ribonucleoprotein) (Scaffold-attachment factor A) (SAF-A) (p120) (pp120)
Gene: HNRNPU

Species: Homo sapiens

Source: mint

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.65	0.60	0.625

The method score is based on:

Property	Details
Experiments	26496610, 22365833
Identification Methods	affinity chromatography technology, two hybrid, anti tag coimmunoprecipitation
Interaction Type	physical association, direct interaction, association

The annotation score is based on:

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0000398 - mRNA splicing, via spliceosome GO:0001649 - osteoblast differentiation GO:0003723 - RNA binding GO:0005634 - nucleus GO:0005654 - nucleoplasm and 9 others more... GO:0005829 - cytosol GO:0006396 - RNA processing GO:0016020 - membrane GO:0070934 - CRD-mediated mRNA stabilization GO:0070937 - CRD-mediated mRNA stability complex GO:0071013 - catalytic step 2 spliceosome GO:1900152 - negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay GO:1990904 - ribonucleoprotein complex GO:2000767 - positive regulation of cytoplasmic translation
Homologous interactions	6

Homologous interactions

Color coding for hit scores

	1	623
Hs

1	825

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024