HitPredict

Interactor 1: SF3B1 (O75533)
Splicing factor 3B subunit 1 (Pre-mRNA-splicing factor SF3b 155 kDa subunit) (SF3b155) (Spliceosome-associated protein 155) (SAP 155)
Gene: SF3B1

Interactor 2: RSMB (P14678)
Small nuclear ribonucleoprotein-associated proteins B and B' (snRNP-B) (Sm protein B/B') (Sm-B/B') (SmB/B')
Gene: SNRPB

Species: Homo sapiens

Source: intact

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.65	0.60	0.628

The method score is based on:

Property	Details
Experiments	33961781, 35271311
Identification Methods	affinity chromatography technology, anti tag coimmunoprecipitation
Interaction Type	physical association, association

The annotation score is based on:

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0000398 - mRNA splicing, via spliceosome GO:0003723 - RNA binding GO:0005634 - nucleus GO:0005654 - nucleoplasm GO:0005681 - spliceosomal complex and 8 others more... GO:0005684 - U2-type spliceosomal complex GO:0005686 - U2 snRNP GO:0005689 - U12-type spliceosomal complex GO:0008380 - RNA splicing GO:0071004 - U2-type prespliceosome GO:0071005 - U2-type precatalytic spliceosome GO:0071013 - catalytic step 2 spliceosome GO:1903241 - U2-type prespliceosome assembly
Homologous interactions	4

Homologous interactions

Color coding for hit scores

	1	1304
Hs

1	240

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024