HitPredict

Interactor 1: SF3B1 (O75533)
Splicing factor 3B subunit 1 (Pre-mRNA-splicing factor SF3b 155 kDa subunit) (SF3b155) (Spliceosome-associated protein 155) (SAP 155)
Gene: SF3B1

Interactor 2: CDC5L (Q99459)
Cell division cycle 5-like protein (Cdc5-like protein) (Pombe cdc5-related protein)
Gene: CDC5L

Species: Homo sapiens

Source: mint

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.81	0.60	0.699

The method score is based on:

Property	Details
Experiments	20467437, 29395067, 11101529, 35271311
Identification Methods	affinity chromatography technology, proximity labelling technology, biochemical, anti tag coimmunoprecipitation, anti bait coimmunoprecipitation
Interaction Type	physical association, association

The annotation score is based on:

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0000398 - mRNA splicing, via spliceosome GO:0003723 - RNA binding GO:0005634 - nucleus GO:0005654 - nucleoplasm GO:0005681 - spliceosomal complex and 3 others more... GO:0016607 - nuclear speck GO:0045944 - positive regulation of transcription by RNA polymerase II GO:0071013 - catalytic step 2 spliceosome
Homologous interactions	5

Homologous interactions

Color coding for hit scores

	1	1304
Hs

1	802

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024