HitPredict

Interactor 1: SNRPA (P09012)
U1 small nuclear ribonucleoprotein A (U1 snRNP A) (U1-A) (U1A)
Gene: SNRPA

Interactor 2: MATR3 (P43243)
Matrin-3
Gene: MATR3

Species: Homo sapiens

Source: intact

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.65	0.60	0.628

Property	Details
Experiments	26496610, 35271311
Identification Methods	affinity chromatography technology, anti tag coimmunoprecipitation
Interaction Type	physical association, association

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0003723 - RNA binding GO:0005634 - nucleus
Homologous interactions	19

Homologous interactions

Color coding for hit scores

	1 282 Hs			1 847
+	Hs
		643443 PTBP1_HUMAN (1-281): 2.58e-55: 189: 20.42		MATR3_HUMAN (1-847): 0: 1198: 100.00
+	Hs
		321006 PTBP3_HUMAN (2-281): 3.29e-49: 172: 19.44		MATR3_HUMAN (1-847): 0: 1198: 100.00
+	Hs
		516399 PABP1_HUMAN (10-219): 3.06e-20: 92.2: 15.09		MATR3_HUMAN (1-847): 0: 1198: 100.00
+	Hs
		446511 SNRPA_HUMAN (1-282): 4.82e-60: 193: 100.00		PTBP1_HUMAN (329-604): 1.42e-92: 304: 17.86
+	Hs
		643426 PTBP1_HUMAN (1-281): 2.58e-55: 189: 20.42		PTBP1_HUMAN (329-604): 1.42e-92: 304: 17.86
+	Hs
		320954 SNRPA_HUMAN (1-282): 4.82e-60: 193: 100.00		PTBP3_HUMAN (333-622): 5.16e-90: 297: 15.39
+	Hs
		320980 PTBP1_HUMAN (1-281): 2.58e-55: 189: 20.42		PTBP3_HUMAN (333-622): 5.16e-90: 297: 15.39
+	Hs
		446833 SNRPA_HUMAN (1-282): 4.82e-60: 193: 100.00		PTBP2_HUMAN (329-625): 1.45e-85: 284: 15.50
+	Hs
		643620 PTBP1_HUMAN (1-281): 2.58e-55: 189: 20.42		PTBP2_HUMAN (329-625): 1.45e-85: 284: 15.50
+	Hs
		321242 PTBP3_HUMAN (2-281): 3.29e-49: 172: 19.44		PTBP2_HUMAN (329-625): 1.45e-85: 284: 15.50
+	Hs
		446498 SNRPA_HUMAN (1-282): 4.82e-60: 193: 100.00		HNRPL_HUMAN (386-644): 2.18e-74: 256: 16.09
+	Hs
		540901 PTBP1_HUMAN (1-281): 2.58e-55: 189: 20.42		HNRPL_HUMAN (386-644): 2.18e-74: 256: 16.09
+	Hs
		47732 RBM47_HUMAN (12-281): 2.3e-39: 146: 18.68		PTBP3_HUMAN (333-622): 5.16e-90: 297: 15.39
+	Hs
		446718 SNRPA_HUMAN (1-282): 4.82e-60: 193: 100.00		HNRLL_HUMAN (392-640): 3.16e-69: 240: 15.94
+	Hs
		643554 PTBP1_HUMAN (1-281): 2.58e-55: 189: 20.42		HNRLL_HUMAN (392-640): 3.16e-69: 240: 15.94
+	Hs
		47746 RBM47_HUMAN (12-281): 2.3e-39: 146: 18.68		HNRPL_HUMAN (386-644): 2.18e-74: 256: 16.09
+	Hs
		516346 PABP1_HUMAN (10-219): 3.06e-20: 92.2: 15.09		HNRPL_HUMAN (386-644): 2.18e-74: 256: 16.09
+	Hs
		446635 SNRPA_HUMAN (1-282): 4.82e-60: 193: 100.00		ZN638_HUMAN (650-843): 4.53e-20: 98.4: 22.97
+	Zm
		8151 A0A1D6ELH4_MAIZE (8-215): 7.46e-19: 88: 19.91		A0A1D6Q1I5_MAIZE (329-637): 1.09e-32: 134: 10.47