HitPredict

Interactor 1: RU1C (P09234)
U1 small nuclear ribonucleoprotein C (U1 snRNP C) (U1-C) (U1C)
Gene: SNRPC

Interactor 2: SMD1 (P62314)
Small nuclear ribonucleoprotein Sm D1 (Sm-D1) (Sm-D autoantigen) (snRNP core protein D1)
Gene: SNRPD1

Species: Homo sapiens

Source: intact

Category: High-throughput

Confidence: High

Method score Annotation score Interaction score
0.74 1.00 0.861

The method score is based on:

Property Details
Experiments 29884807, 33961781, 35271311
Identification Methods affinity chromatography technology, anti tag coimmunoprecipitation
Interaction Type physical association, association

The annotation score is based on:

Property Details
Interacting Pfam domains LSM~zf-U1
Common GO terms GO:0000243 - commitment complex
GO:0000387 - spliceosomal snRNP assembly
GO:0000398 - mRNA splicing, via spliceosome
GO:0003723 - RNA binding
GO:0005634 - nucleus
and 3 others

more...
Homologous interactions 6

Homologous interactions

Color coding for hit scores

1 159
Hs

1 119
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Service provided by Combinatics, Japan

Last updated: 15 Jul 2024