HitPredict

Interactor 1: ARAC (P0A9E0)
Arabinose operon regulatory protein (HTH-type transcriptional regulator AraC)
Gene: ARAC

Interactor 2: ARAC (P0A9E0)
Arabinose operon regulatory protein (HTH-type transcriptional regulator AraC)
Gene: ARAC

Species: Escherichia coli K-12

Source: intact

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.66 1.00 0.817

The method score is based on:

Property Details
Experiments 24561554, 9103202
Identification Methods two hybrid, x-ray crystallography, cosedimentation in solution, two hybrid array
Interaction Type direct interaction, physical association

The annotation score is based on:

Property Details
Interacting Pfam domains AraC_binding~AraC_binding, HTH_18~HTH_18
Common GO terms GO:0000976 - transcription cis-regulatory region binding
GO:0001217 - DNA-binding transcription repressor activity
GO:0005829 - cytosol
GO:0019568 - arabinose catabolic process
GO:0032993 - protein-DNA complex
Homologous interactions 13

Homologous interactions

Color coding for hit scores

1 292
Ec

1 292
+ Ec
+ Ec
+ Ec
+ Ec
+ Ec
+ Ec
+ Ec
+ Ec
+ Bt
+ Ec
+ Ec
+ Pa
+ Bt

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024