HitPredict

Interactor 1: RPOE (P0AGB6)
ECF RNA polymerase sigma-E factor (RNA polymerase sigma-E factor) (Sigma-24)
Gene: RPOE

Interactor 2: RPOE (P0AGB6)
ECF RNA polymerase sigma-E factor (RNA polymerase sigma-E factor) (Sigma-24)
Gene: RPOE

Species: Escherichia coli K-12

Source: intact

Category: High-throughput

Confidence: High

Method score Annotation score Interaction score
0.61 0.90 0.744

The method score is based on:

Property Details
Experiments 24561554, 19834901
Identification Methods two hybrid, two hybrid array
Interaction Type direct interaction, physical association

The annotation score is based on:

Property Details
Interacting Pfam domains Sigma70_r2~Sigma70_r2, Sigma70_r2~Sigma70_r4_2, Sigma70_r4_2~Sigma70_r4_2
Common GO terms GO:0000345 - cytosolic DNA-directed RNA polymerase complex
GO:0003677 - DNA binding
GO:0005737 - cytoplasm
GO:0005886 - plasma membrane
GO:0006352 - DNA-templated transcription initiation
and 9 others

more...
Homologous interactions 0

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024