HitPredict

Interactor 1: RCSB (P0DMC7)
Transcriptional regulatory protein RcsB (Capsular synthesis regulator component B)
Gene: RCSB

Interactor 2: RCSB (P0DMC7)
Transcriptional regulatory protein RcsB (Capsular synthesis regulator component B)
Gene: RCSB

Species: Escherichia coli K-12

Source: intact

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.70 1.00 0.839

The method score is based on:

Property Details
Experiments 24561554, 26635367, 20952573
Identification Methods two hybrid, lex-a dimerization assay, two hybrid array
Interaction Type direct interaction, physical association

The annotation score is based on:

Property Details
Interacting Pfam domains GerE~GerE, GerE~Response_reg, Response_reg~Response_reg
Common GO terms GO:0000160 - phosphorelay signal transduction system
GO:0001216 - DNA-binding transcription activator activity
GO:0001217 - DNA-binding transcription repressor activity
GO:0003677 - DNA binding
GO:0005667 - transcription regulator complex
and 12 others

more...
Homologous interactions 18

Homologous interactions

Color coding for hit scores

1 216
Ec

1 216
+ Ec
+ Ec
+ Ss
+ Mx
+ Bs
+ Mx
+ Ec
+ Ec
+ Ec
+ Bt
+ Mx
+ Ec
+ Ec
+ Ec
+ Ec
+ Mx
+ Mx
+ Mx

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024