HitPredict

Interactor 1: RPA1 (P10964)
DNA-directed RNA polymerase I subunit RPA190 (EC 2.7.7.6) (DNA-directed RNA polymerase I 190 kDa polypeptide) (A190) (DNA-directed RNA polymerase I largest subunit)
Gene: RPA190

Interactor 2: RPA1 (P10964)
DNA-directed RNA polymerase I subunit RPA190 (EC 2.7.7.6) (DNA-directed RNA polymerase I 190 kDa polypeptide) (A190) (DNA-directed RNA polymerase I largest subunit)
Gene: RPA190

Species: Saccharomyces cerevisiae S288C

Source: mint

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.57 1.00 0.759

The method score is based on:

Property Details
Experiments 28262097, 14759368
Identification Methods x-ray crystallography, affinity chromatography technology, anti tag coimmunoprecipitation
Interaction Type association, physical association

The annotation score is based on:

Property Details
Interacting Pfam domains RNA_pol_Rpb1_1~RNA_pol_Rpb1_1, RNA_pol_Rpb1_1~RNA_pol_Rpb1_2, RNA_pol_Rpb1_1~RNA_pol_Rpb1_3, RNA_pol_Rpb1_1~RNA_pol_Rpb1_5, RNA_pol_Rpb1_2~RNA_pol_Rpb1_2, RNA_pol_Rpb1_2~RNA_pol_Rpb1_3, RNA_pol_Rpb1_2~RNA_pol_Rpb1_4, RNA_pol_Rpb1_2~RNA_pol_Rpb1_5, RNA_pol_Rpb1_3~RNA_pol_Rpb1_4, RNA_pol_Rpb1_3~RNA_pol_Rpb1_5, RNA_pol_Rpb1_4~RNA_pol_Rpb1_5, RNA_pol_Rpb1_5~RNA_pol_Rpb1_5
Common GO terms GO:0001054 - RNA polymerase I activity
GO:0003677 - DNA binding
GO:0005634 - nucleus
GO:0005730 - nucleolus
GO:0005736 - RNA polymerase I complex
and 8 others

more...
Homologous interactions 11

Homologous interactions

Color coding for hit scores

1 1664
Sc

1 1664
+ Hs
+ Zm
+ Hs
+ Sc
+ Hs
+ Hs
+ Sc
+ Hv
+ Sc
+ At
+ Hp

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024