HitPredict

Interactor 1: RPB3 (P16370)
DNA-directed RNA polymerase II subunit RPB3 (RNA polymerase II subunit 3) (RNA polymerase II subunit B3) (B44.5) (DNA-directed RNA polymerase II 45 kDa polypeptide)
Gene: RPB3

Interactor 2: RPB3 (P16370)
DNA-directed RNA polymerase II subunit RPB3 (RNA polymerase II subunit 3) (RNA polymerase II subunit B3) (B44.5) (DNA-directed RNA polymerase II 45 kDa polypeptide)
Gene: RPB3

Species: Saccharomyces cerevisiae S288C

Source: mint

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.87	1.00	0.935

The method score is based on:

Property	Details
Experiments	34543624, 33888559, 34592154, 22067100, 23836886, 14759368
Identification Methods	affinity chromatography technology, anti tag coimmunoprecipitation
Interaction Type	physical association

The annotation score is based on:

Property	Details
Interacting Pfam domains	RNA_pol_L~RNA_pol_L
Common GO terms	GO:0001055 - RNA polymerase II activity GO:0001172 - RNA-templated transcription GO:0003677 - DNA binding GO:0005634 - nucleus GO:0005654 - nucleoplasm and 7 others more... GO:0005665 - RNA polymerase II, core complex GO:0006366 - transcription by RNA polymerase II GO:0006367 - transcription initiation at RNA polymerase II promoter GO:0006368 - transcription elongation by RNA polymerase II GO:0006369 - termination of RNA polymerase II transcription GO:0046872 - metal ion binding GO:0046983 - protein dimerization activity
Homologous interactions	5

Homologous interactions

Color coding for hit scores

	1	318
Sc

1	318

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024